{"openapi":"3.0.1","info":{"title":"Cell2Cloud Public API","version":"v2","description":"Benchling V2 URL, parameter and response contract. Resource IDs are Cell2Cloud IDs. Cell2Cloud-specific operations are separate extensions."},"paths":{"/api/v2/custom-entities":{"post":{"description":"Create a custom entity","operationId":"createCustomEntity","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/CustomEntityCreate"}}}},"responses":{"201":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/CustomEntity"}}},"description":"Created"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"},"503":{"description":"Deprecated, a 429 is returned for too many requests"}},"summary":"Create a custom entity","tags":["Custom Entities"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]},"get":{"description":"List custom entities","operationId":"listCustomEntities","parameters":[{"in":"query","name":"nextToken","schema":{"type":"string"}},{"in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"minimum":1,"nullable":false,"type":"integer"}},{"in":"query","name":"sort","schema":{"default":"modifiedAt:desc","description":"Method by which to order search results. Valid sorts are name, modifiedAt, and createdAt. Optionally add :asc or :desc to specify ascending or descending order. Default is modifiedAt.\n","enum":["createdAt","createdAt:asc","createdAt:desc","modifiedAt","modifiedAt:asc","modifiedAt:desc","name","name:asc","name:desc"],"nullable":false,"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those created in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models created within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for created models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models created after a certain date","value":"> 2022-03-01"}},"in":"query","name":"createdAt","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those modified in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models modified within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for modified models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models modified after a certain date","value":"> 2022-03-01"}},"in":"query","name":"modifiedAt","schema":{"type":"string"}},{"description":"Name of a custom entity. Restricts results to those with the specified name, alias, or entity registry ID.","in":"query","name":"name","schema":{"type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).","in":"query","name":"returning","schema":{"example":"customEntities.id,customEntities.modifiedAt","type":"string"}},{"description":"Name substring of a custom entity. Restricts results to those with names, aliases, or entity registry IDs that include the provided substring.\n","in":"query","name":"nameIncludes","schema":{"type":"string"}},{"description":"ID of a folder. Restricts results to those in the folder.","in":"query","name":"folderId","schema":{"type":"string"}},{"description":"Comma-separated list of entry IDs. Restricts results to custom entities mentioned in those entries.\n","in":"query","name":"mentionedIn","schema":{"type":"string"}},{"description":"ID of a project. Restricts results to those in the project.","in":"query","name":"projectId","schema":{"type":"string"}},{"description":"ID of a registry. Restricts results to those registered in this registry. Specifying \"null\" returns unregistered items.\n","in":"query","name":"registryId","schema":{"nullable":true,"type":"string"}},{"description":"ID of a schema. Restricts results to those of the specified schema.\n","in":"query","name":"schemaId","schema":{"type":"string"}},{"description":"Filter based on schema field value (not display value). Restricts results to those with a field whose value matches the filter. For Integer, Float, and Date type fields, supports the >= and <= operators (but not < or >). If any schemaField filters are present, the schemaId param must also be present. Note that all operators must be separated from any values by a single space.\n","in":"query","name":"schemaFields","schema":{"$ref":"#/components/schemas/SchemaFieldsQueryParam"}},{"description":"Archive reason. Restricts items to those with the specified archive reason. Use \"NOT_ARCHIVED\" to filter for unarchived custom entities. Use \"ANY_ARCHIVED\" to filter for archived custom entities regardless of reason. Use \"ANY_ARCHIVED_OR_NOT_ARCHIVED\" to return items for both archived and unarchived.\n","examples":{"1_not_archived":{"summary":"Only include unarchived items (default).","value":"NOT_ARCHIVED"},"2_archived_reason":{"summary":"Includes items archived for a specific reason.","value":"Retired"},"3_any_archived":{"summary":"Includes items archived for any reason.","value":"ANY_ARCHIVED"},"4_any_archived_or_not_archived":{"summary":"Includes both archived and unarchived items.","value":"ANY_ARCHIVED_OR_NOT_ARCHIVED"}},"in":"query","name":"archiveReason","schema":{"type":"string"}},{"description":"Comma-separated list of resource IDs. Restricts results to those that mention the given items in the description.\n","in":"query","name":"mentions","schema":{"type":"string"}},{"description":"Comma-separated list of ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"ids","schema":{"example":"bfi_blhxTUl1,bfi_y5bkDmJp,bfi_xwfILBog","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, aliases, or entity registry IDs, case insensitive.  Warning - this filter can be non-performant due to case insensitivity.\n","in":"query","name":"names.anyOf","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, aliases, or entity registry IDs, case sensitive.\n","in":"query","name":"names.anyOf.caseSensitive","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma-separated list of entity registry IDs. Maximum of 100. Restricts results to those that match any of the specified registry IDs\n","in":"query","name":"entityRegistryIds.anyOf","schema":{"example":"TP001,TP002","type":"string"}},{"description":"Comma separated list of users IDs","in":"query","name":"creatorIds","schema":{"example":"ent_a0SApq3z","type":"string"}},{"description":"Comma separated list of user or app IDs. Maximum of 100.","in":"query","name":"authorIds.anyOf","schema":{"example":"ent_a0SApq3z,ent_b4AApz9b","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/CustomEntitiesPaginatedList"}}},"description":"OK","headers":{"Result-Count":{"description":"The total number of items that match the given query","schema":{"type":"integer"}},"x-rate-limit-limit":{"description":"The number of allowed requests in the current rate-limit period","schema":{"type":"integer"}},"x-rate-limit-remaining":{"description":"The number of seconds remaining in the current rate-limit period","schema":{"type":"integer"}},"x-rate-limit-reset":{"description":"The number of seconds remaining in the current rate-limit period","schema":{"type":"integer"}}}},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List custom entities","tags":["Custom Entities"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/custom-entities/{custom_entity_id}":{"patch":{"description":"Update a custom entity","operationId":"updateCustomEntity","parameters":[{"in":"path","name":"custom_entity_id","required":true,"schema":{"type":"string"}}],"requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/CustomEntityUpdate"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/CustomEntity"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Update a custom entity","tags":["Custom Entities"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]},"get":{"description":"Get a custom entity","operationId":"getCustomEntity","parameters":[{"in":"path","name":"custom_entity_id","required":true,"schema":{"type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).","in":"query","name":"returning","schema":{"example":"id,modifiedAt","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/CustomEntity"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Get a custom entity","tags":["Custom Entities"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/dna-sequences":{"post":{"description":"Create a DNA sequence\n\nCell2Cloud limitations: Unavailable response fields: primers.color.","operationId":"createDNASequence","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaSequenceCreate"}}}},"responses":{"201":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaSequence"}}},"description":"Created"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"},"503":{"description":"Deprecated, a 429 is returned for too many requests"}},"summary":"Create a DNA sequence","tags":["DNA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["primers.color"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]},"get":{"description":"List DNA sequences\n\nCell2Cloud limitations: Unavailable response fields: primers.color.","operationId":"listDNASequences","parameters":[{"description":"Number of results to return. Defaults to 50, maximum of 100.\n","in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"minimum":1,"nullable":false,"type":"integer"}},{"description":"Token for pagination","in":"query","name":"nextToken","schema":{"type":"string"}},{"in":"query","name":"sort","schema":{"default":"modifiedAt:desc","description":"Method by which to order search results. Valid sorts are name, modifiedAt, and createdAt. Optionally add :asc or :desc to specify ascending or descending order. Default is modifiedAt.\n","enum":["createdAt","createdAt:asc","createdAt:desc","modifiedAt","modifiedAt:asc","modifiedAt:desc","name","name:asc","name:desc"],"nullable":false,"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those created in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models created within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for created models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models created after a certain date","value":"> 2022-03-01"}},"in":"query","name":"createdAt","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those modified in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models modified within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for modified models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models modified after a certain date","value":"> 2022-03-01"}},"in":"query","name":"modifiedAt","schema":{"type":"string"}},{"description":"Name of a DNA Sequence. Restricts results to those with the specified name, alias, or entity registry ID.","in":"query","name":"name","schema":{"type":"string"}},{"description":"Name substring of a DNA Sequence. Restricts results to those with names, aliases, or entity registry IDs that include the provided substring.","in":"query","name":"nameIncludes","schema":{"type":"string"}},{"description":"Full bases of the DNA sequence. Restricts results to those with the specified bases, case-insensitive, allowing for circular or reverse complement matches. Does not allow partial matching or loose matching via degenerate bases.","in":"query","name":"bases","schema":{"type":"string"}},{"description":"ID of a folder. Restricts results to those in the folder.","in":"query","name":"folderId","schema":{"type":"string"}},{"description":"Comma-separated list of entry IDs. Restricts results to DNA sequences mentioned in those entries.\n","in":"query","name":"mentionedIn","schema":{"type":"string"}},{"description":"ID of a project. Restricts results to those in the project.","in":"query","name":"projectId","schema":{"type":"string"}},{"description":"ID of a registry. Restricts results to those registered in this registry. Specifying \"null\" returns unregistered items.\n","in":"query","name":"registryId","schema":{"nullable":true,"type":"string"}},{"description":"ID of a schema. Restricts results to those of the specified schema.\n","in":"query","name":"schemaId","schema":{"type":"string"}},{"description":"Filter based on schema field value (not display value). Restricts results to those with a field whose value matches the filter. For Integer, Float, and Date type fields, supports the >= and <= operators (but not < or >). If any schemaField filters are present, the schemaId param must also be present. Note that all operators must be separated from any values by a single space.\n","in":"query","name":"schemaFields","schema":{"$ref":"#/components/schemas/SchemaFieldsQueryParam"}},{"description":"Archive reason. Restricts items to those with the specified archive reason. Use \"NOT_ARCHIVED\" to filter for unarchived DNA sequences. Use \"ANY_ARCHIVED\" to filter for archived DNA sequences regardless of reason. Use \"ANY_ARCHIVED_OR_NOT_ARCHIVED\" to return items for both archived and unarchived.\n","examples":{"1_not_archived":{"summary":"Only include unarchived items (default).","value":"NOT_ARCHIVED"},"2_archived_reason":{"summary":"Includes items archived for a specific reason.","value":"Retired"},"3_any_archived":{"summary":"Includes items archived for any reason.","value":"ANY_ARCHIVED"},"4_any_archived_or_not_archived":{"summary":"Includes both archived and unarchived items.","value":"ANY_ARCHIVED_OR_NOT_ARCHIVED"}},"in":"query","name":"archiveReason","schema":{"type":"string"}},{"description":"Comma-separated list of item IDs. Restricts results to those that mention the given items in the description.\n","in":"query","name":"mentions","schema":{"type":"string"}},{"description":"Comma-separated list of ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"ids","schema":{"example":"seq_VfVOART1,seq_RFhDGaaC","type":"string"}},{"description":"Comma-separated list of entity registry IDs. Maximum of 100. Restricts results to those that match any of the specified registry IDs.\n","in":"query","name":"entityRegistryIds.anyOf","schema":{"example":"TP001,TP002","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, aliases, or entity registry IDs, case insensitive.  Warning - this filter can be non-performant due to case insensitivity.\n","in":"query","name":"names.anyOf","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, aliases, or entity registry IDs, case sensitive.\n","in":"query","name":"names.anyOf.caseSensitive","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma separated list of users IDs","in":"query","name":"creatorIds","schema":{"example":"ent_a0SApq3z","type":"string"}},{"description":"Comma separated list of user or app IDs. Maximum of 100.","in":"query","name":"authorIds.anyOf","schema":{"example":"ent_a0SApq3z,ent_b4AApz9b","type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).\n\n**Note**: Fields annotations, translations, and primers cannot be introspected with the returning parameter, and any sub fields will be ignored. E.g.: \"dnaSequences.annotations.id\" will return the same as \"dnaSequences.annotations\".\n","in":"query","name":"returning","schema":{"example":"dnaSequences.id, dnaSequences.modifiedAt","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaSequencesPaginatedList"}}},"description":"OK","headers":{"Result-Count":{"description":"The total number of items that match the given query","schema":{"type":"integer"}},"x-rate-limit-limit":{"description":"The number of allowed requests in the current rate-limit period","schema":{"type":"integer"}},"x-rate-limit-remaining":{"description":"The number of requests remaining in the current rate-limit period","schema":{"type":"integer"}},"x-rate-limit-reset":{"description":"The number of seconds remaining in the current rate-limit period","schema":{"type":"integer"}}}},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List DNA sequences","tags":["DNA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["primers.color"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/dna-sequences/{dna_sequence_id}":{"patch":{"description":"Update a DNA sequence\n\nCell2Cloud limitations: Unavailable response fields: primers.color.","operationId":"updateDNASequence","parameters":[{"in":"path","name":"dna_sequence_id","required":true,"schema":{"type":"string"}}],"requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaSequenceUpdate"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaSequence"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Update a DNA sequence","tags":["DNA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["primers.color"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]},"get":{"description":"Get a DNA sequence\n\nCell2Cloud limitations: Unavailable response fields: primers.color.","operationId":"getDNASequence","parameters":[{"in":"path","name":"dna_sequence_id","required":true,"schema":{"type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).\n\n**Note**: Fields annotations, translations, and primers cannot be introspected with the returning parameter, and any sub fields will be ignored. E.g.: \"annotations.id\" will return the same as \"annotations\".\n","in":"query","name":"returning","schema":{"example":"id,modifiedAt","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaSequence"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Get a DNA sequence","tags":["DNA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["primers.color"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/aa-sequences":{"post":{"description":"Create an AA sequence","operationId":"createAASequence","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AaSequenceCreate"}}}},"responses":{"201":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AaSequence"}}},"description":"Created"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"},"503":{"description":"Deprecated, a 429 is returned for too many requests"}},"summary":"Create an AA sequence","tags":["AA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]},"get":{"description":"List AA sequences","operationId":"listAASequences","parameters":[{"description":"Number of results to return. Defaults to 50, maximum of 100.\n","in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"minimum":1,"nullable":false,"type":"integer"}},{"description":"Token for pagination","in":"query","name":"nextToken","schema":{"type":"string"}},{"in":"query","name":"sort","schema":{"default":"modifiedAt:desc","description":"Method by which to order search results. Valid sorts are name, modifiedAt, and createdAt. Optionally add :asc or :desc to specify ascending or descending order. Default is modifiedAt.\n","enum":["createdAt","createdAt:asc","createdAt:desc","modifiedAt","modifiedAt:asc","modifiedAt:desc","name","name:asc","name:desc"],"nullable":false,"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those created in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models created within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for created models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models created after a certain date","value":"> 2022-03-01"}},"in":"query","name":"createdAt","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those modified in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models modified within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for modified models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models modified after a certain date","value":"> 2022-03-01"}},"in":"query","name":"modifiedAt","schema":{"type":"string"}},{"description":"Name of an AA Sequence. Restricts results to those with the specified name, alias, or entity registry ID.","in":"query","name":"name","schema":{"type":"string"}},{"description":"Name substring of an AA sequence. Restricts results to those with names, aliases, or entity registry IDs that include the provided substring.","in":"query","name":"nameIncludes","schema":{"type":"string"}},{"description":"String of amino acids. Restricts results to AA sequences exactly matching these amino acids (case-insensitive).","in":"query","name":"aminoAcids","schema":{"type":"string"}},{"description":"ID of a folder. Restricts results to those in the folder.","in":"query","name":"folderId","schema":{"type":"string"}},{"description":"Comma-separated list of entry IDs. Restricts results to AA sequences mentioned in those entries.\n","in":"query","name":"mentionedIn","schema":{"type":"string"}},{"description":"ID of a project. Restricts results to those in the project.","in":"query","name":"projectId","schema":{"type":"string"}},{"description":"ID of a registry. Restricts results to those registered in this registry. Specifying \"null\" returns unregistered items.\n","in":"query","name":"registryId","schema":{"nullable":true,"type":"string"}},{"description":"ID of a schema. Restricts results to those of the specified schema.\n","in":"query","name":"schemaId","schema":{"type":"string"}},{"description":"Filter based on schema field value (not display value). Restricts results to those with a field whose value matches the filter. For Integer, Float, and Date type fields, supports the >= and <= operators (but not < or >). If any schemaField filters are present, the schemaId param must also be present. Note that all operators must be separated from any values by a single space.\n","in":"query","name":"schemaFields","schema":{"$ref":"#/components/schemas/SchemaFieldsQueryParam"}},{"description":"Archive reason. Restricts items to those with the specified archive reason. Use \"NOT_ARCHIVED\" to filter for unarchived AA sequences. Use \"ANY_ARCHIVED\" to filter for archived AA sequences regardless of reason. Use \"ANY_ARCHIVED_OR_NOT_ARCHIVED\" to return items for both archived and unarchived.\n","examples":{"1_not_archived":{"summary":"Only include unarchived items (default).","value":"NOT_ARCHIVED"},"2_archived_reason":{"summary":"Includes items archived for a specific reason.","value":"Retired"},"3_any_archived":{"summary":"Includes items archived for any reason.","value":"ANY_ARCHIVED"},"4_any_archived_or_not_archived":{"summary":"Includes both archived and unarchived items.","value":"ANY_ARCHIVED_OR_NOT_ARCHIVED"}},"in":"query","name":"archiveReason","schema":{"type":"string"}},{"description":"Comma-separated list of item IDs. Restricts results to those that mention the given items in the description.\n","in":"query","name":"mentions","schema":{"type":"string"}},{"description":"Comma-separated list of ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"ids","schema":{"example":"prtn_6gxJGfPh,prtn_u7fOvqWg","type":"string"}},{"description":"Comma-separated list of entity registry IDs. Maximum of 100. Restricts results to those that match any of the specified registry IDs.\n","in":"query","name":"entityRegistryIds.anyOf","schema":{"example":"TP001,TP002","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, aliases, or entity registry IDs, case insensitive.  Warning - this filter can be non-performant due to case insensitivity.\n","in":"query","name":"names.anyOf","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, aliases, or entity registry IDs, case sensitive.\n","in":"query","name":"names.anyOf.caseSensitive","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma separated list of users IDs","in":"query","name":"creatorIds","schema":{"example":"ent_a0SApq3z","type":"string"}},{"description":"Comma separated list of user or app IDs. Maximum of 100.","in":"query","name":"authorIds.anyOf","schema":{"example":"ent_a0SApq3z,ent_b4AApz9b","type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).\n\n**Note**: Fields annotations, translations, and primers cannot be introspected with the returning parameter, and any sub fields will be ignored. E.g.: \"aaSequences.annotations.id\" will return the same as \"aaSequences.annotations\".\n","in":"query","name":"returning","schema":{"example":"aaSequences.id,aaSequences.modifiedAt","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AaSequencesPaginatedList"}}},"description":"OK","headers":{"Result-Count":{"description":"The total number of items that match the given query","schema":{"type":"integer"}},"x-rate-limit-limit":{"description":"The number of allowed requests in the current rate-limit period","schema":{"type":"integer"}},"x-rate-limit-remaining":{"description":"The number of requests remaining in the current rate-limit period","schema":{"type":"integer"}},"x-rate-limit-reset":{"description":"The number of seconds remaining in the current rate-limit period","schema":{"type":"integer"}}}},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List AA sequences","tags":["AA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/aa-sequences/{aa_sequence_id}":{"patch":{"description":"Update an AA sequence","operationId":"updateAASequence","parameters":[{"in":"path","name":"aa_sequence_id","required":true,"schema":{"type":"string"}}],"requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AaSequenceUpdate"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AaSequence"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Update an AA sequence","tags":["AA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]},"get":{"description":"Get an AA sequence","operationId":"getAASequence","parameters":[{"in":"path","name":"aa_sequence_id","required":true,"schema":{"type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).\n\n**Note**: Fields annotations, translations, and primers cannot be introspected with the returning parameter, and any sub fields will be ignored. E.g.: \"annotations.id\" will return the same as \"annotations\".\n","in":"query","name":"returning","schema":{"example":"id,modifiedAt","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AaSequence"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Get an AA sequence","tags":["AA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/rna-sequences":{"post":{"description":"Create an RNA sequence\n\nCell2Cloud limitations: Unsupported request fields: helm, customNotation, customNotationId. Unavailable response fields: helm, primers.color.","operationId":"createRNASequence","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaSequenceCreate"}}}},"responses":{"201":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaSequence"}}},"description":"Created"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"},"503":{"description":"Deprecated, a 429 is returned for too many requests"}},"summary":"Create an RNA sequence","tags":["RNA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":["helm","customNotation","customNotationId"],"omittedResponseFields":["helm","primers.color"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]},"get":{"description":"List RNA sequences\n\nCell2Cloud limitations: Unavailable response fields: helm, primers.color.","operationId":"listRNASequences","parameters":[{"description":"Number of results to return. Defaults to 50, maximum of 100.\n","in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"minimum":1,"nullable":false,"type":"integer"}},{"description":"Token for pagination","in":"query","name":"nextToken","schema":{"type":"string"}},{"description":"Method by which to order search results. Valid sorts are name, modifiedAt, and createdAt. Optionally add :asc or :desc to specify ascending or descending order. Default is modifiedAt.\n","in":"query","name":"sort","schema":{"default":"modifiedAt:desc","enum":["createdAt","createdAt:asc","createdAt:desc","modifiedAt","modifiedAt:asc","modifiedAt:desc","name","name:asc","name:desc"],"nullable":false,"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those created in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models created within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for created models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models created after a certain date","value":"> 2022-03-01"}},"in":"query","name":"createdAt","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those modified in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models modified within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for modified models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models modified after a certain date","value":"> 2022-03-01"}},"in":"query","name":"modifiedAt","schema":{"type":"string"}},{"description":"Name of an RNA Sequence. Restricts results to those with the specified name, alias, or entity registry ID.","in":"query","name":"name","schema":{"type":"string"}},{"description":"Name substring of an RNA Sequence. Restricts results to those with names, aliases, or entity registry IDs that include the provided substring.","in":"query","name":"nameIncludes","schema":{"type":"string"}},{"description":"Full bases of the RNA sequence. Restricts results to those with the specified bases, case-insensitive, allowing for circular or reverse complement matches. Does not allow partial matching or loose matching via degenerate bases.","in":"query","name":"bases","schema":{"type":"string"}},{"description":"ID of a folder. Restricts results to those in the folder.","in":"query","name":"folderId","schema":{"type":"string"}},{"description":"Comma-separated list of entry IDs. Restricts results to RNA sequences mentioned in those entries.\n","in":"query","name":"mentionedIn","schema":{"type":"string"}},{"description":"ID of a project. Restricts results to those in the project.","in":"query","name":"projectId","schema":{"type":"string"}},{"description":"ID of a registry. Restricts results to those registered in this registry. Specifying \"null\" returns unregistered items.\n","in":"query","name":"registryId","schema":{"nullable":true,"type":"string"}},{"description":"ID of a schema. Restricts results to those of the specified schema.\n","in":"query","name":"schemaId","schema":{"type":"string"}},{"description":"Filter based on schema field value (not display value). Restricts results to those with a field whose value matches the filter. For Integer, Float, and Date type fields, supports the >= and <= operators (but not < or >). If any schemaField filters are present, the schemaId param must also be present. Note that all operators must be separated from any values by a single space.\n","in":"query","name":"schemaFields","schema":{"$ref":"#/components/schemas/SchemaFieldsQueryParam"}},{"description":"Archive reason. Restricts items to those with the specified archive reason. Use \"NOT_ARCHIVED\" to filter for unarchived RNA sequences. Use \"ANY_ARCHIVED\" to filter for archived RNA sequences regardless of reason. Use \"ANY_ARCHIVED_OR_NOT_ARCHIVED\" to return items for both archived and unarchived.\n","examples":{"1_not_archived":{"summary":"Only include unarchived items (default).","value":"NOT_ARCHIVED"},"2_archived_reason":{"summary":"Includes items archived for a specific reason.","value":"Retired"},"3_any_archived":{"summary":"Includes items archived for any reason.","value":"ANY_ARCHIVED"},"4_any_archived_or_not_archived":{"summary":"Includes both archived and unarchived items.","value":"ANY_ARCHIVED_OR_NOT_ARCHIVED"}},"in":"query","name":"archiveReason","schema":{"type":"string"}},{"description":"Comma-separated list of item IDs. Restricts results to those that mention the given items in the description.\n","in":"query","name":"mentions","schema":{"type":"string"}},{"description":"Comma-separated list of ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"ids","schema":{"example":"seq_VzVOART1,seq_RahDGaaC","type":"string"}},{"description":"Comma-separated list of entity registry IDs. Maximum of 100. Restricts results to those that match any of the specified registry IDs.\n","in":"query","name":"entityRegistryIds.anyOf","schema":{"example":"TP001,TP002","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, aliases, or entity registry IDs, case insensitive.  Warning - this filter can be non-performant due to case insensitivity.\n","in":"query","name":"names.anyOf","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, aliases, or entity registry IDs, case sensitive.\n","in":"query","name":"names.anyOf.caseSensitive","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma separated list of users IDs","in":"query","name":"creatorIds","schema":{"example":"ent_a0SApq3z","type":"string"}},{"description":"Comma separated list of user or app IDs. Maximum of 100.","in":"query","name":"authorIds.anyOf","schema":{"example":"ent_a0SApq3z,ent_b4AApz9b","type":"string"}},{"description":"ID of the notation to use in populating the customNotation field.","in":"query","name":"customNotationId","schema":{"example":"sntx_lRe007yZ","type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).\n\n**Note**: Fields annotations, translations, and primers cannot be introspected with the returning parameter, and any sub fields will be ignored. E.g.: \"rnaSequences.annotations.id\" will return the same as \"rnaSequences.annotations\".\n","in":"query","name":"returning","schema":{"example":"rnaSequences.id, rnaSequences.modifiedAt","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaSequencesPaginatedList"}}},"description":"OK","headers":{"Result-Count":{"description":"The total number of items that match the given query","schema":{"type":"integer"}},"x-rate-limit-limit":{"description":"The number of allowed requests in the current rate-limit period","schema":{"type":"integer"}},"x-rate-limit-remaining":{"description":"The number of requests remaining in the current rate-limit period","schema":{"type":"integer"}},"x-rate-limit-reset":{"description":"The number of seconds remaining in the current rate-limit period","schema":{"type":"integer"}}}},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List RNA sequences","tags":["RNA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["helm","primers.color"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/rna-sequences/{rna_sequence_id}":{"patch":{"description":"Update an RNA sequence\n\nCell2Cloud limitations: Unsupported request fields: helm, customNotation, customNotationId. Unavailable response fields: helm, primers.color.","operationId":"updateRNASequence","parameters":[{"in":"path","name":"rna_sequence_id","required":true,"schema":{"type":"string"}}],"requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaSequenceUpdate"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaSequence"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Update an RNA sequence","tags":["RNA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":["helm","customNotation","customNotationId"],"omittedResponseFields":["helm","primers.color"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]},"get":{"description":"Get an RNA sequence\n\nCell2Cloud limitations: Unavailable response fields: helm, primers.color.","operationId":"getRNASequence","parameters":[{"in":"path","name":"rna_sequence_id","required":true,"schema":{"type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).\n\n**Note**: Fields annotations, translations, and primers cannot be introspected with the returning parameter, and any sub fields will be ignored. E.g.: \"annotations.id\" will return the same as \"annotations\".\n","in":"query","name":"returning","schema":{"example":"id,modifiedAt","type":"string"}},{"description":"ID of the notation to use in populating the customNotation field.","in":"query","name":"customNotationId","schema":{"example":"sntx_lRe007yZ","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaSequence"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Get an RNA sequence","tags":["RNA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["helm","primers.color"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/dna-oligos":{"post":{"description":"Create a DNA Oligo\n\nCell2Cloud limitations: Unsupported request fields: helm, customNotation, customNotationId. Unavailable response fields: helm.","operationId":"createDNAOligo","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaOligoCreate"}}}},"responses":{"201":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaOligo"}}},"description":"Created"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"},"503":{"description":"Deprecated, a 429 is returned for too many requests"}},"summary":"Create a DNA Oligo","tags":["DNA Oligos"],"x-cell2cloud-compatibility":{"omittedRequestFields":["helm","customNotation","customNotationId"],"omittedResponseFields":["helm"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]},"get":{"description":"List DNA Oligos\n\nCell2Cloud limitations: Unavailable response fields: helm.","operationId":"listDNAOligos","parameters":[{"description":"Number of results to return. Defaults to 50, maximum of 100.\n","in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"minimum":1,"nullable":false,"type":"integer"}},{"description":"Token for pagination","in":"query","name":"nextToken","schema":{"type":"string"}},{"in":"query","name":"sort","schema":{"default":"modifiedAt:desc","description":"Method by which to order search results. Valid sorts are name, modifiedAt, and createdAt. Optionally add :asc or :desc to specify ascending or descending order. Default is modifiedAt.\n","enum":["createdAt","createdAt:asc","createdAt:desc","modifiedAt","modifiedAt:asc","modifiedAt:desc","name","name:asc","name:desc"],"nullable":false,"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those created in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models created within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for created models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models created after a certain date","value":"> 2022-03-01"}},"in":"query","name":"createdAt","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those modified in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models modified within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for modified models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models modified after a certain date","value":"> 2022-03-01"}},"in":"query","name":"modifiedAt","schema":{"type":"string"}},{"description":"Name of a DNA Oligo. Restricts results to those with the specified name, alias, or entity registry ID.","in":"query","name":"name","schema":{"type":"string"}},{"description":"Name substring of a DNA Oligo. Restricts results to those with names, aliases, or entity registry IDs that include the provided substring.","in":"query","name":"nameIncludes","schema":{"type":"string"}},{"description":"Full bases of the DNA Oligo. Restricts results to those with the specified bases, case-insensitive, allowing for circular or reverse complement matches. Does not allow partial matching or loose matching via degenerate bases.\n","in":"query","name":"bases","schema":{"type":"string"}},{"description":"ID of a folder. Restricts results to those in the folder.","in":"query","name":"folderId","schema":{"type":"string"}},{"description":"Comma-separated list of entry IDs. Restricts results to DNA Oligos mentioned in those entries.\n","in":"query","name":"mentionedIn","schema":{"type":"string"}},{"description":"ID of a project. Restricts results to those in the project.","in":"query","name":"projectId","schema":{"type":"string"}},{"description":"ID of a registry. Restricts results to those registered in this registry. Specifying \"null\" returns unregistered items.\n","in":"query","name":"registryId","schema":{"nullable":true,"type":"string"}},{"description":"ID of a schema. Restricts results to those of the specified schema.\n","in":"query","name":"schemaId","schema":{"type":"string"}},{"description":"Filter based on schema field value (not display value). Restricts results to those with a field whose value matches the filter. For Integer, Float, and Date type fields, supports the >= and <= operators (but not < or >). If any schemaField filters are present, the schemaId param must also be present. Note that all operators must be separated from any values by a single space.\n","in":"query","name":"schemaFields","schema":{"$ref":"#/components/schemas/SchemaFieldsQueryParam"}},{"description":"Archive reason. Restricts items to those with the specified archive reason. Use \"NOT_ARCHIVED\" to filter for unarchived DNA Oligos. Use \"ANY_ARCHIVED\" to filter for archived DNA Oligos regardless of reason. Use \"ANY_ARCHIVED_OR_NOT_ARCHIVED\" to return items for both archived and unarchived.\n","examples":{"1_not_archived":{"summary":"Only include unarchived items (default).","value":"NOT_ARCHIVED"},"2_archived_reason":{"summary":"Includes items archived for a specific reason.","value":"Retired"},"3_any_archived":{"summary":"Includes items archived for any reason.","value":"ANY_ARCHIVED"},"4_any_archived_or_not_archived":{"summary":"Includes both archived and unarchived items.","value":"ANY_ARCHIVED_OR_NOT_ARCHIVED"}},"in":"query","name":"archiveReason","schema":{"type":"string"}},{"description":"Comma-separated list of item IDs. Restricts results to those that mention the given items in the description.\n","in":"query","name":"mentions","schema":{"type":"string"}},{"description":"Comma-separated list of ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"ids","schema":{"example":"seq_yWs5X7lv,seq_RhYGVnHF","type":"string"}},{"description":"Comma-separated list of entity registry IDs. Maximum of 100. Restricts results to those that match any of the specified registry IDs.\n","in":"query","name":"entityRegistryIds.anyOf","schema":{"example":"TP001,TP002","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, aliases, or entity registry IDs, case insensitive.  Warning - this filter can be non-performant due to case insensitivity.\n","in":"query","name":"names.anyOf","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, aliases, or entity registry IDs, case sensitive.\n","in":"query","name":"names.anyOf.caseSensitive","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma separated list of users IDs","in":"query","name":"creatorIds","schema":{"example":"ent_a0SApq3z","type":"string"}},{"description":"Comma separated list of user or app IDs. Maximum of 100.","in":"query","name":"authorIds.anyOf","schema":{"example":"ent_a0SApq3z,ent_b4AApz9b","type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).","in":"query","name":"returning","schema":{"example":"dnaOligos.id,dnaOligos.modifiedAt","type":"string"}},{"description":"ID of the notation to use in populating the customNotation field.","in":"query","name":"customNotationId","schema":{"example":"sntx_lRe007yZ","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaOligosPaginatedList"}}},"description":"OK","headers":{"Result-Count":{"description":"The total number of items that match the given query","schema":{"type":"integer"}},"x-rate-limit-limit":{"description":"The number of allowed requests in the current rate-limit period","schema":{"type":"integer"}},"x-rate-limit-remaining":{"description":"The number of requests remaining in the current rate-limit period","schema":{"type":"integer"}},"x-rate-limit-reset":{"description":"The number of seconds remaining in the current rate-limit period","schema":{"type":"integer"}}}},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List DNA Oligos","tags":["DNA Oligos"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["helm"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/dna-oligos/{oligo_id}":{"patch":{"description":"Update a DNA Oligo\n\nCell2Cloud limitations: Unsupported request fields: helm, customNotation, customNotationId. Unavailable response fields: helm.","operationId":"updateDNAOligo","parameters":[{"in":"path","name":"oligo_id","required":true,"schema":{"type":"string"}}],"requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaOligoUpdate"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaOligo"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Update a DNA Oligo","tags":["DNA Oligos"],"x-cell2cloud-compatibility":{"omittedRequestFields":["helm","customNotation","customNotationId"],"omittedResponseFields":["helm"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]},"get":{"description":"Get a DNA Oligo\n\nCell2Cloud limitations: Unavailable response fields: helm.","operationId":"getDNAOligo","parameters":[{"in":"path","name":"oligo_id","required":true,"schema":{"type":"string"}},{"description":"ID of the notation to use in populating the customNotation field.","in":"query","name":"customNotationId","schema":{"example":"sntx_lRe007yZ","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaOligo"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Get a DNA Oligo","tags":["DNA Oligos"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["helm"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/rna-oligos":{"post":{"description":"Create an RNA Oligo\n\nCell2Cloud limitations: Unsupported request fields: helm, customNotation, customNotationId. Unavailable response fields: helm.","operationId":"createRNAOligo","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaOligoCreate"}}}},"responses":{"201":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaOligo"}}},"description":"Created"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"},"503":{"description":"Deprecated, a 429 is returned for too many requests"}},"summary":"Create an RNA Oligo","tags":["RNA Oligos"],"x-cell2cloud-compatibility":{"omittedRequestFields":["helm","customNotation","customNotationId"],"omittedResponseFields":["helm"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]},"get":{"description":"List RNA Oligos\n\nCell2Cloud limitations: Unavailable response fields: helm.","operationId":"listRNAOligos","parameters":[{"description":"Number of results to return. Defaults to 50, maximum of 100.\n","in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"minimum":1,"nullable":false,"type":"integer"}},{"description":"Token for pagination","in":"query","name":"nextToken","schema":{"type":"string"}},{"in":"query","name":"sort","schema":{"default":"modifiedAt:desc","description":"Method by which to order search results. Valid sorts are name, modifiedAt, and createdAt. Optionally add :asc or :desc to specify ascending or descending order. Default is modifiedAt.\n","enum":["createdAt","createdAt:asc","createdAt:desc","modifiedAt","modifiedAt:asc","modifiedAt:desc","name","name:asc","name:desc"],"nullable":false,"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those created in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models created within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for created models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models created after a certain date","value":"> 2022-03-01"}},"in":"query","name":"createdAt","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those modified in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models modified within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for modified models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models modified after a certain date","value":"> 2022-03-01"}},"in":"query","name":"modifiedAt","schema":{"type":"string"}},{"description":"Name of an RNA Oligo. Restricts results to those with the specified name, alias, or entity registry ID.","in":"query","name":"name","schema":{"type":"string"}},{"description":"Name substring of an RNA Oligo. Restricts results to those with names, aliases, or entity registry IDs that include the provided substring.","in":"query","name":"nameIncludes","schema":{"type":"string"}},{"description":"Full bases of the RNA Oligo. Restricts results to those with the specified bases, case-insensitive, allowing for circular or reverse complement matches. Does not allow partial matching or loose matching via degenerate bases.\n","in":"query","name":"bases","schema":{"type":"string"}},{"description":"ID of a folder. Restricts results to those in the folder.","in":"query","name":"folderId","schema":{"type":"string"}},{"description":"Comma-separated list of entry IDs. Restricts results to RNA Oligos mentioned in those entries.\n","in":"query","name":"mentionedIn","schema":{"type":"string"}},{"description":"ID of a project. Restricts results to those in the project.","in":"query","name":"projectId","schema":{"type":"string"}},{"description":"ID of a registry. Restricts results to those registered in this registry. Specifying \"null\" returns unregistered items.\n","in":"query","name":"registryId","schema":{"nullable":true,"type":"string"}},{"description":"ID of a schema. Restricts results to those of the specified schema.\n","in":"query","name":"schemaId","schema":{"type":"string"}},{"description":"Filter based on schema field value (not display value). Restricts results to those with a field whose value matches the filter. For Integer, Float, and Date type fields, supports the >= and <= operators (but not < or >). If any schemaField filters are present, the schemaId param must also be present. Note that all operators must be separated from any values by a single space.\n","in":"query","name":"schemaFields","schema":{"$ref":"#/components/schemas/SchemaFieldsQueryParam"}},{"description":"Archive reason. Restricts items to those with the specified archive reason. Use \"NOT_ARCHIVED\" to filter for unarchived RNA Oligos. Use \"ANY_ARCHIVED\" to filter for archived RNA Oligos regardless of reason. Use \"ANY_ARCHIVED_OR_NOT_ARCHIVED\" to return items for both archived and unarchived.\n","examples":{"1_not_archived":{"summary":"Only include unarchived items (default).","value":"NOT_ARCHIVED"},"2_archived_reason":{"summary":"Includes items archived for a specific reason.","value":"Retired"},"3_any_archived":{"summary":"Includes items archived for any reason.","value":"ANY_ARCHIVED"},"4_any_archived_or_not_archived":{"summary":"Includes both archived and unarchived items.","value":"ANY_ARCHIVED_OR_NOT_ARCHIVED"}},"in":"query","name":"archiveReason","schema":{"type":"string"}},{"description":"Comma-separated list of item IDs. Restricts results to those that mention the given items in the description.\n","in":"query","name":"mentions","schema":{"type":"string"}},{"description":"Comma-separated list of ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"ids","schema":{"example":"seq_yWs5X7lv,seq_RhYGVnHF","type":"string"}},{"description":"Comma-separated list of entity registry IDs. Maximum of 100. Restricts results to those that match any of the specified registry IDs.\n","in":"query","name":"entityRegistryIds.anyOf","schema":{"example":"TP001,TP002","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, aliases, or entity registry IDs, case insensitive.  Warning - this filter can be non-performant due to case insensitivity.\n","in":"query","name":"names.anyOf","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, aliases, or entity registry IDs, case sensitive.\n","in":"query","name":"names.anyOf.caseSensitive","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma separated list of users IDs","in":"query","name":"creatorIds","schema":{"example":"ent_a0SApq3z","type":"string"}},{"description":"Comma separated list of user or app IDs. Maximum of 100.","in":"query","name":"authorIds.anyOf","schema":{"example":"ent_a0SApq3z,ent_b4AApz9b","type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).","in":"query","name":"returning","schema":{"example":"rnaOligos.id,rnaOligos.modifiedAt","type":"string"}},{"description":"ID of the notation to use in populating the customNotation field.","in":"query","name":"customNotationId","schema":{"example":"sntx_lRe007yZ","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaOligosPaginatedList"}}},"description":"OK","headers":{"Result-Count":{"description":"The total number of items that match the given query","schema":{"type":"integer"}},"x-rate-limit-limit":{"description":"The number of allowed requests in the current rate-limit period","schema":{"type":"integer"}},"x-rate-limit-remaining":{"description":"The number of requests remaining in the current rate-limit period","schema":{"type":"integer"}},"x-rate-limit-reset":{"description":"The number of seconds remaining in the current rate-limit period","schema":{"type":"integer"}}}},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List RNA Oligos","tags":["RNA Oligos"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["helm"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/rna-oligos/{oligo_id}":{"patch":{"description":"Update an RNA Oligo\n\nCell2Cloud limitations: Unsupported request fields: helm, customNotation, customNotationId. Unavailable response fields: helm.","operationId":"updateRNAOligo","parameters":[{"in":"path","name":"oligo_id","required":true,"schema":{"type":"string"}}],"requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaOligoUpdate"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaOligo"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Update an RNA Oligo","tags":["RNA Oligos"],"x-cell2cloud-compatibility":{"omittedRequestFields":["helm","customNotation","customNotationId"],"omittedResponseFields":["helm"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]},"get":{"description":"Get an RNA Oligo\n\nCell2Cloud limitations: Unavailable response fields: helm.","operationId":"getRNAOligo","parameters":[{"in":"path","name":"oligo_id","required":true,"schema":{"type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).","in":"query","name":"returning","schema":{"example":"id,modifiedAt","type":"string"}},{"description":"ID of the notation to use in populating the customNotation field.","in":"query","name":"customNotationId","schema":{"example":"sntx_lRe007yZ","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaOligo"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Get an RNA Oligo","tags":["RNA Oligos"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["helm"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/entity-schemas":{"get":{"description":"List entity schemas","operationId":"listEntitySchemas","parameters":[{"in":"query","name":"nextToken","schema":{"type":"string"}},{"in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"minimum":1,"nullable":false,"type":"integer"}},{"description":"Datetime, in RFC 3339 format. 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Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models modified within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for modified models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models modified after a certain date","value":"> 2022-03-01"}},"in":"query","name":"modifiedAt","schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/EntitySchemasPaginatedList"}}},"description":"OK","headers":{"Result-Count":{"description":"The total number of schemas that match the given query","schema":{"type":"integer"}},"x-rate-limit-limit":{"description":"The number of allowed requests in the current rate-limit period","schema":{"type":"integer"}},"x-rate-limit-remaining":{"description":"The number of calls remaining in the current rate-limit period","schema":{"type":"integer"}},"x-rate-limit-reset":{"description":"The number of seconds remaining in the current rate-limit period","schema":{"type":"integer"}}}},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List entity schemas","tags":["Schemas"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/entity-schemas/{schema_id}":{"get":{"description":"Get an entity schema by ID","operationId":"getEntitySchema","parameters":[{"description":"ID of schema to get","in":"path","name":"schema_id","required":true,"schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/EntitySchema"}}},"description":"OK"},"400":{"description":"Bad Request"},"404":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/NotFoundError"}}},"description":"Not Found"}},"summary":"Get an entity schema by ID","tags":["Schemas"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/container-schemas":{"get":{"description":"List container schemas","operationId":"listContainerSchemas","parameters":[{"in":"query","name":"nextToken","schema":{"type":"string"}},{"in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"minimum":1,"nullable":false,"type":"integer"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those modified in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models modified within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for modified models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models modified after a certain date","value":"> 2022-03-01"}},"in":"query","name":"modifiedAt","schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ContainerSchemasPaginatedList"}}},"description":"OK","headers":{"Result-Count":{"description":"The total number of schemas that match the given query","schema":{"type":"integer"}},"x-rate-limit-limit":{"description":"The number of allowed requests in the current rate-limit 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Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models modified within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for modified models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models modified after a certain date","value":"> 2022-03-01"}},"in":"query","name":"modifiedAt","schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AssayResultSchemasPaginatedList"}}},"description":"OK","headers":{"Result-Count":{"description":"The total number of schemas that match the given query","schema":{"type":"integer"}},"x-rate-limit-limit":{"description":"The number of allowed assay results in the current rate-limit 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period","schema":{"type":"integer"}},"x-rate-limit-reset":{"description":"The number of seconds remaining in the current rate-limit period","schema":{"type":"integer"}}}},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"},"403":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ForbiddenError"}}},"description":"Forbidden"},"404":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/NotFoundError"}}},"description":"Not Found"}},"summary":"Get a dropdown","tags":["Dropdowns"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/registries":{"get":{"description":"List registries","operationId":"listRegistries","parameters":[{"description":"Name of a registry. Restricts results to those with the specified name.","in":"query","name":"name","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those modified in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models modified within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for modified models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models modified after a certain date","value":"> 2022-03-01"}},"in":"query","name":"modifiedAt","schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RegistriesList"}}},"description":"OK"}},"summary":"List registries","tags":["Registry"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/registries/{registry_id}":{"get":{"description":"Get registry","operationId":"getRegistry","parameters":[{"description":"ID for the registry","in":"path","name":"registry_id","required":true,"schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Registry"}}},"description":"OK"},"404":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/NotFoundError"}}},"description":"Not Found"}},"summary":"Get registry","tags":["Registry"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/projects":{"get":{"description":"List projects","operationId":"listProjects","parameters":[{"in":"query","name":"nextToken","schema":{"type":"string"}},{"in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"minimum":1,"nullable":false,"type":"integer"}},{"description":"Method by which to order search results. Valid sorts are name, modifiedAt, and createdAt. Optionally add :asc or :desc to specify ascending or descending order. Default is modifiedAt.\n","in":"query","name":"sort","schema":{"default":"modifiedAt","enum":["createdAt","createdAt:asc","createdAt:desc","modifiedAt","name","modifiedAt:asc","name:asc","modifiedAt:desc","name:desc"],"nullable":false,"type":"string"}},{"description":"Archive reason. Restricts items to those with the specified archive reason. Use \"NOT_ARCHIVED\" to filter for unarchived projects. Use \"ANY_ARCHIVED\" to filter for archived projects regardless of reason. Use \"ANY_ARCHIVED_OR_NOT_ARCHIVED\" to return items for both archived and unarchived.\n","examples":{"1_not_archived":{"summary":"Only include unarchived items (default).","value":"NOT_ARCHIVED"},"2_archived_reason":{"summary":"Includes items archived for a specific reason.","value":"Retired"},"3_any_archived":{"summary":"Includes items archived for any reason.","value":"ANY_ARCHIVED"},"4_any_archived_or_not_archived":{"summary":"Includes both archived and unarchived items.","value":"ANY_ARCHIVED_OR_NOT_ARCHIVED"}},"in":"query","name":"archiveReason","schema":{"type":"string"}},{"description":"Comma-separated list of ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"ids","schema":{"example":"src_ZJy8RTbo,src_8GVbVkPj,src_qREJ33rn","type":"string"}},{"description":"Name of a project. Restricts results to those with the specified name.","in":"query","name":"name","schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ProjectsPaginatedList"}}},"description":"OK"}},"summary":"List projects","tags":["Projects"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/projects/{project_id}":{"get":{"description":"Get a project by ID","operationId":"getProject","parameters":[{"description":"ID of project to get","in":"path","name":"project_id","required":true,"schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Project"}}},"description":"OK"},"404":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/NotFoundError"}}},"description":"Not Found"}},"summary":"Get a project by ID","tags":["Projects"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/folders":{"get":{"description":"List folders","operationId":"listFolders","parameters":[{"in":"query","name":"nextToken","schema":{"type":"string"}},{"in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"minimum":1,"nullable":false,"type":"integer"}},{"description":"Method by which to order search results. Valid sorts are modifiedAt (modified time, most recent first) and name (folder name, alphabetical). Optionally add :asc or :desc to specify ascending or descending order.\n","in":"query","name":"sort","schema":{"default":"name","enum":["createdAt","createdAt:asc","createdAt:desc","modifiedAt","name","modifiedAt:asc","name:asc","modifiedAt:desc","name:desc"],"nullable":false,"type":"string"}},{"description":"Archive reason. Restricts items to those with the specified archive reason. Use \"NOT_ARCHIVED\" to filter for unarchived folders. Use \"ANY_ARCHIVED\" to filter for archived folders regardless of reason. Use \"ANY_ARCHIVED_OR_NOT_ARCHIVED\" to return items for both archived and unarchived.\n","examples":{"1_not_archived":{"summary":"Only include unarchived items (default).","value":"NOT_ARCHIVED"},"2_archived_reason":{"summary":"Includes items archived for a specific reason.","value":"Retired"},"3_any_archived":{"summary":"Includes items archived for any reason.","value":"ANY_ARCHIVED"},"4_any_archived_or_not_archived":{"summary":"Includes both archived and unarchived items.","value":"ANY_ARCHIVED_OR_NOT_ARCHIVED"}},"in":"query","name":"archiveReason","schema":{"type":"string"}},{"description":"Name substring of a folder. Restricts results to those with names that include the provided substring.\n","in":"query","name":"nameIncludes","schema":{"type":"string"}},{"description":"ID of a folder. Restricts results to those in the folder. Use \"NO_PARENT\" to filter for root folders.","in":"query","name":"parentFolderId","schema":{"type":"string"}},{"description":"ID of a project. Restricts results to those in the project.","in":"query","name":"projectId","schema":{"type":"string"}},{"description":"Comma-separated list of ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"ids","schema":{"example":"lib_qQFY3WQH,lib_QvXryHdi,lib_3eF8mZjn","type":"string"}},{"description":"Name of a folder. Restricts results to those with the specified name.","in":"query","name":"name","schema":{"type":"string"}},{"deprecated":true,"description":"Deprecated - Folder types have been merged, however this will restrict to the pre-merge types.\n","in":"query","name":"section","schema":{"enum":["INVENTORY","NOTEBOOK"],"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/FoldersPaginatedList"}}},"description":"OK"}},"summary":"List folders","tags":["Folders"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/folders/{folder_id}":{"get":{"description":"Get a folder by ID","operationId":"getFolder","parameters":[{"description":"ID of folder to get","in":"path","name":"folder_id","required":true,"schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Folder"}}},"description":"OK"},"404":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/NotFoundError"}}},"description":"Not Found"}},"summary":"Get a folder by ID","tags":["Folders"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/custom-entities:bulk-create":{"post":{"description":"Bulk Create custom entities. Limit of 2500 custom entities per request.","operationId":"bulkCreateCustomEntities","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/CustomEntitiesBulkCreateRequest"}}}},"responses":{"202":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AsyncTaskLink"}}},"description":"This endpoint launches a [long-running task](#/Tasks/getTask) and returns the Task ID of the launched task.\nThe task response contains the full list of custom entities that were created.\n"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Bulk Create custom entities","tags":["Custom Entities"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/custom-entities:bulk-update":{"post":{"description":"Bulk Update custom entities","operationId":"bulkUpdateCustomEntities","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/CustomEntitiesBulkUpdateRequest"}}}},"responses":{"202":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AsyncTaskLink"}}},"description":"This endpoint launches a [long-running task](#/Tasks/getTask) and returns the Task ID of the launched task.\nThe task response contains the full list of custom entities that were updated.\n"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Bulk Update custom entities","tags":["Custom Entities"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/custom-entities:archive":{"post":{"description":"Archive custom entities","operationId":"archiveCustomEntities","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/CustomEntitiesArchive"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/CustomEntitiesArchivalChange"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Archive custom entities","tags":["Custom Entities"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/custom-entities:unarchive":{"post":{"description":"Unarchive custom entities","operationId":"unarchiveCustomEntities","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/CustomEntitiesUnarchive"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/CustomEntitiesArchivalChange"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Unarchive custom entities","tags":["Custom Entities"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/dna-sequences:bulk-create":{"post":{"description":"Bulk Create DNA sequences. Limit of 1000 DNA Sequences per request.\n\nCell2Cloud limitations: Unavailable response fields: primers.color.","operationId":"bulkCreateDNASequences","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaSequencesBulkCreateRequest"}}}},"responses":{"202":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AsyncTaskLink"}}},"description":"This endpoint launches a [long-running task](#/Tasks/getTask) and returns the Task ID of the launched task.\nWhen successful, the task returns a full list of [DNA Sequence](#/DNA%20Sequences/getDNASequence) resources that were created.\n"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Bulk Create DNA sequences","tags":["DNA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["primers.color"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/dna-sequences:bulk-update":{"post":{"description":"Bulk Update DNA sequences. Limit of 1000 DNA Sequences per request.\n\nCell2Cloud limitations: Unavailable response fields: primers.color.","operationId":"bulkUpdateDNASequences","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaSequencesBulkUpdateRequest"}}}},"responses":{"202":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AsyncTaskLink"}}},"description":"This endpoint launches a [long-running task](#/Tasks/getTask) and returns the Task ID of the launched task.\nWhen successful, the task returns a full list of [DNA Sequence](#/DNA%20Sequences/getDNASequence) resources that were updated.\n"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Bulk Update DNA sequences","tags":["DNA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["primers.color"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/dna-sequences:archive":{"post":{"description":"Archive DNA sequences\n\nCell2Cloud limitations: Unavailable response fields: primers.color.","operationId":"archiveDNASequences","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaSequencesArchive"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaSequencesArchivalChange"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Archive DNA sequences","tags":["DNA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["primers.color"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/dna-sequences:unarchive":{"post":{"description":"Unarchive DNA sequences\n\nCell2Cloud limitations: Unavailable response fields: primers.color.","operationId":"unarchiveDNASequences","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaSequencesUnarchive"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaSequencesArchivalChange"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Unarchive DNA sequences","tags":["DNA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["primers.color"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/aa-sequences:bulk-create":{"post":{"description":"Bulk Create AA sequences. Limit of 1000 AA Sequences per request.","operationId":"bulkCreateAASequences","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AaSequencesBulkCreateRequest"}}}},"responses":{"202":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AsyncTaskLink"}}},"description":"This endpoint launches a [long-running task](#/Tasks/getTask) and returns the Task ID of the launched task.\nThe task response contains the full list of AA Sequences that were created.\n"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Bulk Create AA sequences","tags":["AA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/aa-sequences:bulk-update":{"post":{"description":"Bulk Update AA sequences","operationId":"bulkUpdateAASequences","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AaSequencesBulkUpdateRequest"}}}},"responses":{"202":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AsyncTaskLink"}}},"description":"This endpoint launches a [long-running task](#/Tasks/getTask) and returns the Task ID of the launched task.\nWhen successful, the task returns a full list of [AA Sequence](#/AA%20Sequences/bulkGetAASequences) resources\nthat were updated.\n"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Bulk Update AA sequences","tags":["AA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/aa-sequences:archive":{"post":{"description":"Archive AA sequences","operationId":"archiveAASequences","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AaSequencesArchive"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AaSequencesArchivalChange"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Archive AA sequences","tags":["AA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/aa-sequences:unarchive":{"post":{"description":"Unarchive AA sequences","operationId":"unarchiveAASequences","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AaSequencesUnarchive"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AaSequencesArchivalChange"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Unarchive AA sequences","tags":["AA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/rna-sequences:bulk-create":{"post":{"description":"Bulk Create RNA sequences. Limit of 1000 RNA Sequences per request.\n\nCell2Cloud limitations: Unsupported request fields: helm, customNotation, customNotationId. Unavailable response fields: helm, primers.color.","operationId":"bulkCreateRNASequences","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaSequencesBulkCreateRequest"}}}},"responses":{"202":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AsyncTaskLink"}}},"description":"This endpoint launches a [long-running task](#/Tasks/getTask) and returns the Task ID of the launched task.\nWhen successful, the task returns a full list of [RNA Sequence](#/RNA%20Sequences/bulkGetRNASequences) resources that were created.\n"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Bulk Create RNA sequences","tags":["RNA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":["helm","customNotation","customNotationId"],"omittedResponseFields":["helm","primers.color"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/rna-sequences:bulk-update":{"post":{"description":"Bulk Update RNA sequences\n\nCell2Cloud limitations: Unsupported request fields: helm, customNotation, customNotationId. Unavailable response fields: helm, primers.color.","operationId":"bulkUpdateRNASequences","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaSequencesBulkUpdateRequest"}}}},"responses":{"202":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AsyncTaskLink"}}},"description":"This endpoint launches a [long-running task](#/Tasks/getTask) and returns the Task ID of the launched task.\nWhen successful, the task returns a full list of [RNA Sequences](#/RNA%20Sequences/bulkGetRNASequences) resources that were updated.\n"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Bulk Update RNA sequences","tags":["RNA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":["helm","customNotation","customNotationId"],"omittedResponseFields":["helm","primers.color"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/rna-sequences:archive":{"post":{"description":"Archive RNA Sequences. RNA sequences that are already registered will not be removed from the registry.\n\nCell2Cloud limitations: Unavailable response fields: helm, primers.color.","operationId":"archiveRNASequences","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaSequencesArchive"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaSequencesArchivalChange"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Archive RNA Sequences","tags":["RNA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["helm","primers.color"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/rna-sequences:unarchive":{"post":{"description":"Unarchive RNA sequences\n\nCell2Cloud limitations: Unavailable response fields: helm, primers.color.","operationId":"unarchiveRNASequences","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaSequencesUnarchive"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaSequencesArchivalChange"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Unarchive RNA sequences","tags":["RNA Sequences"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["helm","primers.color"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/dna-oligos:bulk-create":{"post":{"description":"Bulk Create DNA Oligos. Limit of 1000 DNA Oligos per request.\n\nCell2Cloud limitations: Unsupported request fields: helm, customNotation, customNotationId. Unavailable response fields: helm.","operationId":"bulkCreateDNAOligos","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaOligosBulkCreateRequest"}}}},"responses":{"202":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AsyncTaskLink"}}},"description":"This endpoint launches a [long-running task](#/Tasks/getTask) and returns the Task ID of the launched task.\nThe task response contains the full list of DNA Oligos that were created.\n"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Bulk Create DNA Oligos","tags":["DNA Oligos"],"x-cell2cloud-compatibility":{"omittedRequestFields":["helm","customNotation","customNotationId"],"omittedResponseFields":["helm"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/dna-oligos:bulk-update":{"post":{"description":"Bulk Update DNA Oligos\n\nCell2Cloud limitations: Unsupported request fields: helm, customNotation, customNotationId. Unavailable response fields: helm.","operationId":"bulkUpdateDNAOligos","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaOligosBulkUpdateRequest"}}}},"responses":{"202":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AsyncTaskLink"}}},"description":"This endpoint launches a [long-running task](#/Tasks/getTask) and returns the Task ID of the launched task.\nWhen successful, the task returns a full list of [DNA Oligo](#/DNA%20Oligos/getDNAOligo) resources that were updated.\n"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Bulk Update DNA Oligos","tags":["DNA Oligos"],"x-cell2cloud-compatibility":{"omittedRequestFields":["helm","customNotation","customNotationId"],"omittedResponseFields":["helm"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/dna-oligos:archive":{"post":{"description":"Archive DNA Oligos\n\nCell2Cloud limitations: Unavailable response fields: helm.","operationId":"archiveDNAOligos","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaOligosArchive"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaOligosArchivalChange"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Archive DNA Oligos","tags":["DNA Oligos"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["helm"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/dna-oligos:unarchive":{"post":{"description":"Unarchive DNA Oligos\n\nCell2Cloud limitations: Unavailable response fields: helm.","operationId":"unarchiveDNAOligos","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaOligosUnarchive"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DnaOligosArchivalChange"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Unarchive DNA Oligos","tags":["DNA Oligos"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["helm"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/rna-oligos:bulk-create":{"post":{"description":"Bulk Create RNA Oligos. Limit of 1000 RNA Oligos per request.\n\nCell2Cloud limitations: Unsupported request fields: helm, customNotation, customNotationId. Unavailable response fields: helm.","operationId":"bulkCreateRNAOligos","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaOligosBulkCreateRequest"}}}},"responses":{"202":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AsyncTaskLink"}}},"description":"This endpoint launches a [long-running task](#/Tasks/getTask) and returns the Task ID of the launched task.\nThe task response contains the full list of RNA Oligos that were created.\n"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Bulk Create RNA Oligos","tags":["RNA Oligos"],"x-cell2cloud-compatibility":{"omittedRequestFields":["helm","customNotation","customNotationId"],"omittedResponseFields":["helm"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/rna-oligos:bulk-update":{"post":{"description":"Bulk Update RNA Oligos\n\nCell2Cloud limitations: Unsupported request fields: helm, customNotation, customNotationId. Unavailable response fields: helm.","operationId":"bulkUpdateRNAOligos","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaOligosBulkUpdateRequest"}}}},"responses":{"202":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AsyncTaskLink"}}},"description":"This endpoint launches a [long-running task](#/Tasks/getTask) and returns the Task ID of the launched task.\nWhen successful, the task returns a full list of [RNA Oligo](#/RNA%20Oligos/getRNAOligo) resources that were updated.\n"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Bulk Update RNA Oligos","tags":["RNA Oligos"],"x-cell2cloud-compatibility":{"omittedRequestFields":["helm","customNotation","customNotationId"],"omittedResponseFields":["helm"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/rna-oligos:archive":{"post":{"description":"Archive RNA Oligos\n\nCell2Cloud limitations: Unavailable response fields: helm.","operationId":"archiveRNAOligos","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaOligosArchive"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaOligosArchivalChange"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Archive RNA Oligos","tags":["RNA Oligos"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["helm"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/rna-oligos:unarchive":{"post":{"description":"Unarchive RNA Oligos\n\nCell2Cloud limitations: Unavailable response fields: helm.","operationId":"unarchiveRNAOligos","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaOligosUnarchive"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/RnaOligosArchivalChange"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Unarchive RNA Oligos","tags":["RNA Oligos"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":["helm"],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/tasks/{task_id}":{"get":{"description":"Get a task by id","operationId":"getTask","parameters":[{"description":"UUID of the task","example":"f438d656-c2c3-40a4-b3fd-d7e58db78242","in":"path","name":"task_id","required":true,"schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"examples":{"AA Sequences - Bulk Create":{"$ref":"#/components/examples/BulkOperateAaSequencesTaskResponse"},"AA Sequences - Bulk Update":{"$ref":"#/components/examples/BulkOperateAaSequencesTaskResponse"},"AA Sequences - Find Matching Region":{"$ref":"#/components/examples/AaSequencesFindMatchingRegionTaskResponse"},"Audit - Export Audit Log":{"$ref":"#/components/examples/AuditLogTaskResponse"},"Containers - Bulk Create":{"$ref":"#/components/examples/BulkOperateContainersTaskResponse"},"Containers - Bulk Update":{"$ref":"#/components/examples/BulkOperateContainersTaskResponse"},"Containers - Transfers":{"$ref":"#/components/examples/TransfersTaskResponse"},"Custom Entities - Bulk Create":{"$ref":"#/components/examples/BulkOperateCustomEntitiesTaskResponse"},"Custom Entities - Bulk Update":{"$ref":"#/components/examples/BulkOperateCustomEntitiesTaskResponse"},"DNA Alignments - Create Consensus Alignment":{"$ref":"#/components/examples/DnaCreateAlignmentTaskResponse"},"DNA Alignments - Create Template Alignment":{"$ref":"#/components/examples/DnaCreateAlignmentTaskResponse"},"DNA Oligos - Bulk Create":{"$ref":"#/components/examples/BulkOperateDnaOligosTaskResponse"},"DNA Oligos - Bulk Update":{"$ref":"#/components/examples/BulkOperateDnaOligosTaskResponse"},"DNA Sequences - Auto Annotate":{"$ref":"#/components/examples/EmptySuccessTaskResponse"},"DNA Sequences - Autofill Parts":{"$ref":"#/components/examples/EmptySuccessTaskResponse"},"DNA Sequences - Autofill Transcriptions":{"$ref":"#/components/examples/EmptySuccessTaskResponse"},"DNA Sequences - Autofill Translations":{"$ref":"#/components/examples/EmptySuccessTaskResponse"},"DNA Sequences - Bulk Create":{"$ref":"#/components/examples/BulkOperateDnaSequencesTaskResponse"},"DNA Sequences - Bulk Update":{"$ref":"#/components/examples/BulkOperateDnaSequencesTaskResponse"},"Exports - Export Item":{"$ref":"#/components/examples/ExportsTaskResponse"},"Features - Bulk Create":{"$ref":"#/components/examples/BulkOperateFeaturesTaskResponse"},"Lab Automation - Generate Input":{"$ref":"#/components/examples/AIGGenerateInputTaskResponse"},"Lab Automation - Process Output":{"$ref":"#/components/examples/AOPProcessOutputTaskResponse"},"RNA Oligos - Bulk Create":{"$ref":"#/components/examples/BulkOperateRnaOligosTaskResponse"},"RNA Oligos - Bulk Update":{"$ref":"#/components/examples/BulkOperateRnaOligosTaskResponse"},"RNA Sequences - Auto Annotate":{"$ref":"#/components/examples/EmptySuccessTaskResponse"},"RNA Sequences - Autofill Parts":{"$ref":"#/components/examples/EmptySuccessTaskResponse"},"RNA Sequences - Autofill Translations":{"$ref":"#/components/examples/EmptySuccessTaskResponse"},"RNA Sequences - Bulk Create":{"$ref":"#/components/examples/BulkOperateRnaSequencesTaskResponse"},"RNA Sequences - Bulk Update":{"$ref":"#/components/examples/BulkOperateRnaSequencesTaskResponse"},"Registry - Bulk Register Entities":{"$ref":"#/components/examples/EmptySuccessTaskResponse"},"Task Failed":{"$ref":"#/components/examples/TaskFailed"},"Task Failed (Bulk)":{"$ref":"#/components/examples/BulkTaskFailed"},"Task Running":{"$ref":"#/components/examples/TaskRunning"}},"schema":{"oneOf":[{"$ref":"#/components/schemas/AsyncTask"},{"$ref":"#/components/schemas/CreateTemplateAlignmentAsyncTask"},{"$ref":"#/components/schemas/CreateConsensusAlignmentAsyncTask"},{"$ref":"#/components/schemas/CreateNucleotideTemplateAlignmentAsyncTask"},{"$ref":"#/components/schemas/CreateNucleotideConsensusAlignmentAsyncTask"},{"$ref":"#/components/schemas/BulkCreateDnaSequencesAsyncTask"},{"$ref":"#/components/schemas/BulkUpdateDnaSequencesAsyncTask"},{"$ref":"#/components/schemas/BulkCreateRnaSequencesAsyncTask"},{"$ref":"#/components/schemas/BulkUpdateRnaSequencesAsyncTask"},{"$ref":"#/components/schemas/AutofillPartsAsyncTask"},{"$ref":"#/components/schemas/AutofillTranscriptionsAsyncTask"},{"$ref":"#/components/schemas/AutofillTranslationsAsyncTask"},{"$ref":"#/components/schemas/BulkRegisterEntitiesAsyncTask"},{"$ref":"#/components/schemas/BulkCreateDnaOligosAsyncTask"},{"$ref":"#/components/schemas/BulkUpdateDnaOligosAsyncTask"},{"$ref":"#/components/schemas/BulkCreateRnaOligosAsyncTask"},{"$ref":"#/components/schemas/BulkCreateAaSequencesAsyncTask"},{"$ref":"#/components/schemas/BulkCreateCustomEntitiesAsyncTask"},{"$ref":"#/components/schemas/BulkUpdateCustomEntitiesAsyncTask"},{"$ref":"#/components/schemas/BulkCreateContainersAsyncTask"},{"$ref":"#/components/schemas/BulkUpdateContainersAsyncTask"},{"$ref":"#/components/schemas/BulkUpdateAaSequencesAsyncTask"},{"$ref":"#/components/schemas/BulkUpdateRnaOligosAsyncTask"},{"$ref":"#/components/schemas/TransfersAsyncTask"},{"$ref":"#/components/schemas/AOPProcessOutputAsyncTask"},{"$ref":"#/components/schemas/AIGGenerateInputAsyncTask"},{"$ref":"#/components/schemas/ExportsAsyncTask"},{"$ref":"#/components/schemas/ExportAuditLogAsyncTask"},{"$ref":"#/components/schemas/BulkCreateFeaturesAsyncTask"},{"$ref":"#/components/schemas/FindMatchingRegionsAsyncTask"},{"$ref":"#/components/schemas/FindMatchingRegionsDnaAsyncTask"}]}}},"description":"OK"},"404":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/NotFoundError"}}},"description":"Not Found"}},"summary":"Get a task by id","tags":["Tasks"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/containers":{"get":{"description":"List containers","operationId":"listContainers","parameters":[{"description":"Number of results to return.","in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"nullable":false,"type":"integer","minimum":1}},{"description":"Token for pagination","in":"query","name":"nextToken","schema":{"type":"string"}},{"description":"Method by which to order search results. Valid sorts are barcode, name, modifiedAt, and createdAt. Optionally add :asc or :desc to specify ascending or descending order. Default is modifiedAt.\n","in":"query","name":"sort","schema":{"default":"modifiedAt","enum":["createdAt","barcode","modifiedAt","name","barcode:asc","modifiedAt:asc","name:asc","barcode:desc","modifiedAt:desc","name:desc","createdAt:asc","createdAt:desc"],"nullable":false,"type":"string"}},{"description":"ID of a schema. Restricts results to those of the specified schema.","in":"query","name":"schemaId","schema":{"type":"string"}},{"description":"Filter based on schema field value (not display value). Restricts results to those with a field whose value matches the filter. For Integer, Float, and Date type fields, supports the >= and <= operators (but not < or >). If any schemaField filters are present, the schemaId param must also be present. Note that all operators must be separated from any values by a single space.\n","in":"query","name":"schemaFields","schema":{"$ref":"#/components/schemas/SchemaFieldsQueryParam"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those created in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models created within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for created models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models created after a certain date","value":"> 2022-03-01"}},"in":"query","name":"createdAt","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those modified in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models modified within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for modified models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models modified after a certain date","value":"> 2022-03-01"}},"in":"query","name":"modifiedAt","schema":{"type":"string"}},{"description":"Name of a container. Restricts results to those with the specified name.","in":"query","name":"name","schema":{"type":"string"}},{"description":"Name substring of a container. Restricts results to those with names that include the provided substring.\n","in":"query","name":"nameIncludes","schema":{"type":"string"}},{"description":"ID of a plate, box, or location. Restricts results to those located in the specified inventory.","in":"query","name":"ancestorStorageId","schema":{"type":"string"}},{"description":"ID of an entity or entity schema. Restricts results to those that contain the specified entities or entities of the specified schema.\n","in":"query","name":"storageContentsId","schema":{"type":"string"}},{"description":"Comma-separated list of IDs of entities. Restricts results to those that hold containers with at least one of the specified entities.\n","in":"query","name":"storageContentsIds","schema":{"type":"string"}},{"description":"Archive reason. Restricts items to those with the specified archive reason. Use \"NOT_ARCHIVED\" to filter for unarchived containers. Use \"ANY_ARCHIVED\" to filter for archived containers regardless of reason. Use \"ANY_ARCHIVED_OR_NOT_ARCHIVED\" to return items for both archived and unarchived.\n","examples":{"1_not_archived":{"summary":"Only include unarchived items (default).","value":"NOT_ARCHIVED"},"2_archived_reason":{"summary":"Includes items archived for a specific reason.","value":"Retired"},"3_any_archived":{"summary":"Includes items archived for any reason.","value":"ANY_ARCHIVED"},"4_any_archived_or_not_archived":{"summary":"Includes both archived and unarchived items.","value":"ANY_ARCHIVED_OR_NOT_ARCHIVED"}},"in":"query","name":"archiveReason","schema":{"type":"string"}},{"description":"Comma-separated list of check-out statuses. Restricts results to those that match one of the specified statuses. Valid statuses are AVAILABLE, RESERVED, and CHECKED_OUT.\n","in":"query","name":"checkoutStatus","schema":{"enum":["AVAILABLE","RESERVED","CHECKED_OUT"],"type":"string"}},{"description":"Comma-separated list of user or team IDs. Maximum of 100. Restricts results to those that are reserved or checked out for a user or team who matches any of the specified IDs or returns a 400 error with a list of invalid IDs.\n","in":"query","name":"checkoutAssigneeIds.anyOf","schema":{"example":"ent_a0SApq3z,team_Il92ydiY","type":"string"}},{"description":"Comma-separated list of restriction statuses. Restricts results to those that match one of the specified statuses. Valid statuses are RESTRICTED, UNRESTRICTED, and NOT_APPLICABLE.\n","in":"query","name":"restrictionStatus","schema":{"$ref":"#/components/schemas/SampleRestrictionStatus"}},{"description":"Comma-separated list of user or team IDs. Restricts results to those that match all of the specified IDs or returns a 400 error with a list of invalid IDs.\n","in":"query","name":"sampleOwnerIds.allOf","schema":{"example":"ent_a0SApq3z,team_Il92ydiY","type":"string"}},{"description":"Comma-separated list of user or team IDs. Maximum of 100. Restricts results to those that match any of the specified IDs or returns a 400 error with a list of invalid IDs.\n","in":"query","name":"sampleOwnerIds.anyOf","schema":{"example":"ent_a0SApq3z,team_Il92ydiY","type":"string"}},{"description":"Comma-separated list of user or team IDs. Restricts results to those that do not match any of the specified IDs or returns a 400 error with a list of invalid IDs.\n","in":"query","name":"sampleOwnerIds.noneOf","schema":{"example":"ent_a0SApq3z,team_Il92ydiY","type":"string"}},{"description":"Comma-separated list of user, team, or app IDs. Restricts results to those that match all of the specified IDs or returns a 400 error with a list of invalid IDs.\n","in":"query","name":"restrictedSamplePartyIds.allOf","schema":{"example":"ent_a0SApq3z,team_Il92ydiY","type":"string"}},{"description":"Comma-separated list of user, team, or app IDs. Maximum of 100. Restricts results to those that match any of the specified IDs or returns a 400 error with a list of invalid IDs.\n","in":"query","name":"restrictedSamplePartyIds.anyOf","schema":{"example":"ent_a0SApq3z,team_Il92ydiY","type":"string"}},{"description":"Comma-separated list of user, team, or app IDs. Restricts results to those that do not match any of the specified IDs or returns a 400 error with a list of invalid IDs.\n","in":"query","name":"restrictedSamplePartyIds.noneOf","schema":{"example":"ent_a0SApq3z,team_Il92ydiY","type":"string"}},{"description":"Comma-separated list of ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"ids","schema":{"example":"con_Q6uhNZvw,con_OwmERWGE,con_nzuDFhNvz","type":"string"}},{"description":"Comma-separated list of barcodes. Matches all of the provided barcodes, or returns a 400 error that includes a list of which barcodes are invalid.\n","in":"query","name":"barcodes","schema":{"example":"W103371,W103343,W103366","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, case insensitive.  Warning - this filter can be non-performant due to case insensitivity.\n","in":"query","name":"names.anyOf","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, case sensitive.\n","in":"query","name":"names.anyOf.caseSensitive","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma separated list of users IDs","in":"query","name":"creatorIds","schema":{"example":"ent_a0SApq3z","type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).","in":"query","name":"returning","schema":{"example":"containers.id,containers.modifiedAt","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ContainersPaginatedList"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"allOf":[{"$ref":"#/components/schemas/BadRequestError"}],"properties":{"invalidIds":{"items":{"type":"string"},"type":"array"}},"type":"object"}}},"description":"Bad Request"}},"summary":"List containers","tags":["Containers"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/containers/{container_id}":{"get":{"description":"get a container by id","operationId":"getContainer","parameters":[{"in":"path","name":"container_id","required":true,"schema":{"type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).","in":"query","name":"returning","schema":{"example":"id,modifiedAt","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Container"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"},"404":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/NotFoundError"}}},"description":"Not Found"}},"summary":"get a container by id","tags":["Containers"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/plates":{"get":{"description":"List plates","operationId":"listPlates","parameters":[{"description":"Number of results to return. Defaults to 50, maximum of 100.\n","in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"minimum":1,"nullable":false,"type":"integer"}},{"description":"Token for pagination","in":"query","name":"nextToken","schema":{"type":"string"}},{"description":"Method by which to order search results. Valid sorts are barcode, name, modifiedAt, and createdAt. Optionally add :asc or :desc to specify ascending or descending order. Default is modifiedAt.\n","in":"query","name":"sort","schema":{"default":"modifiedAt:desc","enum":["barcode","barcode:asc","barcode:desc","modifiedAt","modifiedAt:asc","modifiedAt:desc","name","name:asc","name:desc","createdAt","createdAt:asc","createdAt:desc"],"nullable":false,"type":"string"}},{"description":"ID of a schema. Restricts results to those of the specified schema.\n","in":"query","name":"schemaId","schema":{"type":"string"}},{"description":"Filter based on schema field value (not display value). Restricts results to those with a field whose value matches the filter. For Integer, Float, and Date type fields, supports the >= and <= operators (but not < or >). If any schemaField filters are present, the schemaId param must also be present. Note that all operators must be separated from any values by a single space.\n","in":"query","name":"schemaFields","schema":{"$ref":"#/components/schemas/SchemaFieldsQueryParam"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those created in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models created within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for created models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models created after a certain date","value":"> 2022-03-01"}},"in":"query","name":"createdAt","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those modified in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models modified within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for modified models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models modified after a certain date","value":"> 2022-03-01"}},"in":"query","name":"modifiedAt","schema":{"type":"string"}},{"description":"Name of a plate. Restricts results to those with the specified name.","in":"query","name":"name","schema":{"type":"string"}},{"description":"Name substring of a plate. Restricts results to those with names that include the provided substring.\n","in":"query","name":"nameIncludes","schema":{"type":"string"}},{"description":"Only return plates that have the specified number of empty positions\n","in":"query","name":"emptyPositions","schema":{"type":"integer"}},{"description":"Only return plates that have greater-than or equal-to the specified number of empty positions.\n","in":"query","name":"emptyPositions.gte","schema":{"type":"integer"}},{"description":"Only return plates that have greater-than the specified number of empty positions.\n","in":"query","name":"emptyPositions.gt","schema":{"type":"integer"}},{"description":"Only return plates that have less-than or equal-to the specified number of empty positions.\n","in":"query","name":"emptyPositions.lte","schema":{"type":"integer"}},{"description":"Only return plates that have less-than the specified number of empty positions.\n","in":"query","name":"emptyPositions.lt","schema":{"type":"integer"}},{"description":"Only return plates that have the specified number of empty containers (containers without contents).\n","in":"query","name":"emptyContainers","schema":{"type":"integer"}},{"description":"Only return plates that have greater-than or equal-to the specified number of empty containers (containers without contents).\n","in":"query","name":"emptyContainers.gte","schema":{"type":"integer"}},{"description":"Only return plates that have greater-than the specified number of empty containers (containers without contents).\n","in":"query","name":"emptyContainers.gt","schema":{"type":"integer"}},{"description":"Only return plates that have less-than or equal-to the specified number of empty containers (containers without contents).\n","in":"query","name":"emptyContainers.lte","schema":{"type":"integer"}},{"description":"Only return plates that have less-than the specified number of empty containers (containers without contents).\n","in":"query","name":"emptyContainers.lt","schema":{"type":"integer"}},{"description":"ID of a location. Restricts results to those located in the specified inventory.\n","in":"query","name":"ancestorStorageId","schema":{"type":"string"}},{"description":"ID of a entity, or entity schema. Restricts results to those that hold containers with entities.\n","in":"query","name":"storageContentsId","schema":{"type":"string"}},{"description":"Comma-separated list of IDs of entities. Restricts results to those that hold containers with at least one of the specified entities.\n","in":"query","name":"storageContentsIds","schema":{"type":"string"}},{"description":"Archive reason. Restricts items to those with the specified archive reason. Use \"NOT_ARCHIVED\" to filter for unarchived plates. Use \"ANY_ARCHIVED\" to filter for archived plates regardless of reason. Use \"ANY_ARCHIVED_OR_NOT_ARCHIVED\" to return items for both archived and unarchived.\n","examples":{"1_not_archived":{"summary":"Only include unarchived items (default).","value":"NOT_ARCHIVED"},"2_archived_reason":{"summary":"Includes items archived for a specific reason.","value":"Retired"},"3_any_archived":{"summary":"Includes items archived for any reason.","value":"ANY_ARCHIVED"},"4_any_archived_or_not_archived":{"summary":"Includes both archived and unarchived items.","value":"ANY_ARCHIVED_OR_NOT_ARCHIVED"}},"in":"query","name":"archiveReason","schema":{"type":"string"}},{"description":"Comma-separated list of ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"ids","schema":{"example":"plt_xd4hj4eB,plt_xd4hj4C","type":"string"}},{"description":"Comma-separated list of barcodes. Matches all of the provided barcodes, or returns a 400 error that includes a list of which barcodes are invalid.\n","in":"query","name":"barcodes","schema":{"example":"W102477,W102478","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, case insensitive.  Warning - this filter can be non-performant due to case insensitivity.\n","in":"query","name":"names.anyOf","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, case sensitive.\n","in":"query","name":"names.anyOf.caseSensitive","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).\n","in":"query","name":"returning","schema":{"example":"plates.id,plates.wells.*.webURL","type":"string"}},{"description":"Comma separated list of users IDs","in":"query","name":"creatorIds","schema":{"example":"ent_a0SApq3z","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/PlatesPaginatedList"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List plates","tags":["Plates"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/plates/{plate_id}":{"get":{"description":"Get a plate","operationId":"getPlate","parameters":[{"in":"path","name":"plate_id","required":true,"schema":{"type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).\n","in":"query","name":"returning","schema":{"example":"id,webURL","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Plate"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"},"404":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/NotFoundError"}}},"description":"Not Found"}},"summary":"Get a plate","tags":["Plates"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/boxes":{"get":{"description":"List boxes","operationId":"listBoxes","parameters":[{"description":"Number of results to return. Defaults to 50, maximum of 100.\n","in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"minimum":1,"nullable":false,"type":"integer"}},{"description":"Token for pagination","in":"query","name":"nextToken","schema":{"type":"string"}},{"in":"query","name":"sort","schema":{"default":"modifiedAt:desc","description":"Method by which to order search results. Valid sorts are barcode, name, modifiedAt, and createdAt. Optionally add :asc or :desc to specify ascending or descending order. Default is modifiedAt.\n","enum":["modifiedAt","modifiedAt:asc","modifiedAt:desc","name","name:asc","name:desc","createdAt","createdAt:asc","createdAt:desc","barcode","barcode:asc","barcode:desc"],"nullable":false,"type":"string"}},{"description":"ID of a schema. Restricts results to those of the specified schema.\n","in":"query","name":"schemaId","schema":{"type":"string"}},{"description":"Filter based on schema field value (not display value). Restricts results to those with a field whose value matches the filter. For Integer, Float, and Date type fields, supports the >= and <= operators (but not < or >). If any schemaField filters are present, the schemaId param must also be present. Note that all operators must be separated from any values by a single space.\n","in":"query","name":"schemaFields","schema":{"$ref":"#/components/schemas/SchemaFieldsQueryParam"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those created in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models created within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for created models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models created after a certain date","value":"> 2022-03-01"}},"in":"query","name":"createdAt","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those modified in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models modified within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for modified models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models modified after a certain date","value":"> 2022-03-01"}},"in":"query","name":"modifiedAt","schema":{"type":"string"}},{"description":"Name of a box. Restricts results to those with the specified name.","in":"query","name":"name","schema":{"type":"string"}},{"description":"Name substring of a box. Restricts results to those with names that include the provided substring.\n","in":"query","name":"nameIncludes","schema":{"type":"string"}},{"description":"Only return boxes that have the specified number of empty positions\n","in":"query","name":"emptyPositions","schema":{"type":"integer"}},{"description":"Only return boxes that have greater-than or equal-to the specified number of empty positions.\n","in":"query","name":"emptyPositions.gte","schema":{"type":"integer"}},{"description":"Only return boxes that have greater-than the specified number of empty positions.\n","in":"query","name":"emptyPositions.gt","schema":{"type":"integer"}},{"description":"Only return boxes that have less-than or equal-to the specified number of empty positions.\n","in":"query","name":"emptyPositions.lte","schema":{"type":"integer"}},{"description":"Only return boxes that have less-than the specified number of empty positions.\n","in":"query","name":"emptyPositions.lt","schema":{"type":"integer"}},{"description":"Only return boxes that have the specified number of empty containers (containers without contents).\n","in":"query","name":"emptyContainers","schema":{"type":"integer"}},{"description":"Only return boxes that have greater-than or equal-to the specified number of empty containers (containers without contents).\n","in":"query","name":"emptyContainers.gte","schema":{"type":"integer"}},{"description":"Only return boxes that have greater-than the specified number of empty containers (containers without contents).\n","in":"query","name":"emptyContainers.gt","schema":{"type":"integer"}},{"description":"Only return boxes that have less-than or equal-to the specified number of empty containers (containers without contents).\n","in":"query","name":"emptyContainers.lte","schema":{"type":"integer"}},{"description":"Only return boxes that have less-than the specified number of empty containers (containers without contents).\n","in":"query","name":"emptyContainers.lt","schema":{"type":"integer"}},{"description":"ID of a location. Restricts results to those located in the specified inventory.\n","in":"query","name":"ancestorStorageId","schema":{"type":"string"}},{"description":"ID of a entity, or entity schema. Restricts results to those that hold containers with entities associated with the specified ID.\n","in":"query","name":"storageContentsId","schema":{"type":"string"}},{"description":"Comma-separated list of IDs of entities. Restricts results to those that hold containers with at least one of the specified entities.\n","in":"query","name":"storageContentsIds","schema":{"type":"string"}},{"description":"Archive reason. Restricts items to those with the specified archive reason. Use \"NOT_ARCHIVED\" to filter for unarchived boxes. Use \"ANY_ARCHIVED\" to filter for archived boxes regardless of reason. Use \"ANY_ARCHIVED_OR_NOT_ARCHIVED\" to return items for both archived and unarchived.\n","examples":{"1_not_archived":{"summary":"Only include unarchived items (default).","value":"NOT_ARCHIVED"},"2_archived_reason":{"summary":"Includes items archived for a specific reason.","value":"Retired"},"3_any_archived":{"summary":"Includes items archived for any reason.","value":"ANY_ARCHIVED"},"4_any_archived_or_not_archived":{"summary":"Includes both archived and unarchived items.","value":"ANY_ARCHIVED_OR_NOT_ARCHIVED"}},"in":"query","name":"archiveReason","schema":{"type":"string"}},{"description":"Comma-separated list of ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"ids","schema":{"example":"box_Jx8Zsphf,box_s9Zv7Jto,box_mFDuLwA6","type":"string"}},{"description":"Comma-separated list of barcodes. Matches all of the provided barcodes, or returns a 400 error that includes a list of which barcodes are invalid.\n","in":"query","name":"barcodes","schema":{"example":"10x10-BOX105,10x10-BOX115","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, case insensitive.  Warning - this filter can be non-performant due to case insensitivity.\n","in":"query","name":"names.anyOf","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, case sensitive.\n","in":"query","name":"names.anyOf.caseSensitive","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma separated list of users IDs","in":"query","name":"creatorIds","schema":{"example":"ent_a0SApq3z","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BoxesPaginatedList"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List boxes","tags":["Boxes"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/boxes/{box_id}":{"get":{"description":"Get a box","operationId":"getBox","parameters":[{"in":"path","name":"box_id","required":true,"schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Box"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Get a box","tags":["Boxes"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/locations":{"get":{"description":"List locations","operationId":"listLocations","parameters":[{"description":"Number of results to return.","in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"nullable":false,"type":"integer","minimum":1}},{"description":"Token for pagination","in":"query","name":"nextToken","schema":{"type":"string"}},{"description":"Method by which to order search results. Valid sorts are barcode, name, modifiedAt, and createdAt. Optionally add :asc or :desc to specify ascending or descending order. Default is modifiedAt.\n","in":"query","name":"sort","schema":{"default":"modifiedAt","enum":["barcode","modifiedAt","name","barcode:asc","modifiedAt:asc","name:asc","barcode:desc","modifiedAt:desc","name:desc","createdAt","createdAt:asc","createdAt:desc"],"nullable":false,"type":"string"}},{"description":"ID of a schema. Restricts results to those of the specified schema.","in":"query","name":"schemaId","schema":{"type":"string"}},{"description":"Filter based on schema field value (not display value). Restricts results to those with a field whose value matches the filter. For Integer, Float, and Date type fields, supports the >= and <= operators (but not < or >). If any schemaField filters are present, the schemaId param must also be present. Note that all operators must be separated from any values by a single space.\n","in":"query","name":"schemaFields","schema":{"$ref":"#/components/schemas/SchemaFieldsQueryParam"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those created in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models created within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for created models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models created after a certain date","value":"> 2022-03-01"}},"in":"query","name":"createdAt","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those modified in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models modified within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for modified models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models modified after a certain date","value":"> 2022-03-01"}},"in":"query","name":"modifiedAt","schema":{"type":"string"}},{"description":"Name of a location. Restricts results to those with the specified name.","in":"query","name":"name","schema":{"type":"string"}},{"description":"Name substring of a location. Restricts results to those with names that include the provided substring.\n","in":"query","name":"nameIncludes","schema":{"type":"string"}},{"description":"ID of a plate, box, or location. Restricts results to those located in the specified inventory.","in":"query","name":"ancestorStorageId","schema":{"type":"string"}},{"description":"Archive reason. Restricts items to those with the specified archive reason. Use \"NOT_ARCHIVED\" to filter for unarchived locations. Use \"ANY_ARCHIVED\" to filter for archived locations regardless of reason. Use \"ANY_ARCHIVED_OR_NOT_ARCHIVED\" to return items for both archived and unarchived.\n","examples":{"1_not_archived":{"summary":"Only include unarchived items (default).","value":"NOT_ARCHIVED"},"2_archived_reason":{"summary":"Includes items archived for a specific reason.","value":"Retired"},"3_any_archived":{"summary":"Includes items archived for any reason.","value":"ANY_ARCHIVED"},"4_any_archived_or_not_archived":{"summary":"Includes both archived and unarchived items.","value":"ANY_ARCHIVED_OR_NOT_ARCHIVED"}},"in":"query","name":"archiveReason","schema":{"type":"string"}},{"description":"Comma-separated list of ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"ids","schema":{"example":"loc_9fxPzGDy,loc_fALwBTI7,loc_GyxUeUIi","type":"string"}},{"description":"Comma-separated list of barcodes. Matches all of the provided barcodes, or returns a 400 error that includes a list of which barcodes are invalid.\n","in":"query","name":"barcodes","schema":{"example":"b001, b002, f001","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, case insensitive.  Warning - this filter can be non-performant due to case insensitivity.\n","in":"query","name":"names.anyOf","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, case sensitive.\n","in":"query","name":"names.anyOf.caseSensitive","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma separated list of users IDs","in":"query","name":"creatorIds","schema":{"example":"ent_a0SApq3z","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/LocationsPaginatedList"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List locations","tags":["Locations"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/locations/{location_id}":{"get":{"description":"Get a location by ID","operationId":"getLocation","parameters":[{"description":"ID of location to get","in":"path","name":"location_id","required":true,"schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Location"}}},"description":"OK"},"400":{"description":"Bad Request"},"404":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/NotFoundError"}}},"description":"Not Found"}},"summary":"Get a location by ID","tags":["Locations"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/assay-results":{"get":{"description":"List results","operationId":"listAssayResults","parameters":[{"description":"ID of the assay result schema to filter by","in":"query","name":"schemaId","required":false,"schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those created before the specified time. e.g. < 2017-04-30.\n","in":"query","name":"createdAt.lt","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those created after the specified time. e.g. > 2017-04-30.\n","in":"query","name":"createdAt.gt","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those created on or before the specified time. e.g. <= 2017-04-30.\n","in":"query","name":"createdAt.lte","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those created on or after the specified time. e.g. >= 2017-04-30.\n","in":"query","name":"createdAt.gte","schema":{"type":"string"}},{"deprecated":true,"description":"Filter by results created after this unix timestamp","in":"query","name":"minCreatedTime","schema":{"type":"integer"}},{"deprecated":true,"description":"Filter by results created before this unix timestamp","in":"query","name":"maxCreatedTime","schema":{"type":"integer"}},{"description":"Method by which to order search results. Valid sorts are createdAt (created time, oldest first). Use :asc or :desc to specify ascending or descending order. Default is createdAt:asc.\n","in":"query","name":"sort","schema":{"default":"createdAt:asc","enum":["createdAt:asc","createdAt:desc","modifiedAt:asc","modifiedAt:desc"],"nullable":false,"type":"string"}},{"description":"Token for pagination","in":"query","name":"nextToken","schema":{"type":"string"}},{"description":"Number of results to return. Defaults to 50, maximum of 100.","in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"minimum":1,"nullable":false,"type":"integer"}},{"description":"Filter by comma-separated list of related Entity IDs, maximum of 20.","in":"query","name":"entityIds","schema":{"type":"string"}},{"description":"Filter by comma-separated list of related inventory (container, box, plate, or location) IDs, maximum of 20.\n","in":"query","name":"storageIds","schema":{"type":"string"}},{"description":"Filter by comma-separated list of associated AssayRun IDs. At most one of {assayRunIds, automationOutputProcessorId} may be supplied.","in":"query","name":"assayRunIds","schema":{"type":"string"}},{"description":"Filter by Automation Output Processor ID. Either this or schemaId is required; if both are given, the associated schemas must match. At most one of {assayRunIds, automationOutputProcessorId} may be supplied.","in":"query","name":"automationOutputProcessorId","schema":{"type":"string"}},{"description":"Comma-separated list of ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"ids","schema":{"format":"uuid","type":"string"}},{"description":"Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those modified before the specified time. e.g. < 2017-04-30.\n","in":"query","name":"modifiedAt.lt","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those modified after the specified time. e.g. > 2017-04-30.\n","in":"query","name":"modifiedAt.gt","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those modified on or before the specified time. e.g. <= 2017-04-30.\n","in":"query","name":"modifiedAt.lte","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those modified on or after the specified time. e.g. >= 2017-04-30.\n","in":"query","name":"modifiedAt.gte","schema":{"type":"string"}},{"description":"Archive reason. Restricts items to those with the specified archive reason. Use \"NOT_ARCHIVED\" to filter for unarchived Assay Results. Use \"ANY_ARCHIVED\" to filter for archived Assay Results regardless of reason. Use \"ANY_ARCHIVED_OR_NOT_ARCHIVED\" to return items for both archived and unarchived.\n","examples":{"1_not_archived":{"summary":"Only include unarchived items (default).","value":"NOT_ARCHIVED"},"2_archived_reason":{"summary":"Includes items archived for a specific reason.","value":"Retired"},"3_any_archived":{"summary":"Includes items archived for any reason.","value":"ANY_ARCHIVED"},"4_any_archived_or_not_archived":{"summary":"Includes both archived and unarchived items.","value":"ANY_ARCHIVED_OR_NOT_ARCHIVED"}},"in":"query","name":"archiveReason","schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AssayResultsPaginatedList"}}},"description":"OK"}},"summary":"List results","tags":["Assay Results"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]},"post":{"description":"Create 1 or more results.\nIf you are looking to add results to a specific table in a notebook entry, please use the  [assay-results bulk-create](#/Assay%20Results/bulkCreateAssayResults) endpoint instead.\n","operationId":"createAssayResults","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AssayResultsBulkCreateRequest"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AssayResultsCreateResponse"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Create 1 or more results.","tags":["Assay Results"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/assay-results/{assay_result_id}":{"get":{"description":"Get a result","operationId":"getAssayResult","parameters":[{"in":"path","name":"assay_result_id","required":true,"schema":{"format":"uuid","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AssayResult"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Get a result","tags":["Assay Results"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/users":{"get":{"description":"Returns all users that the caller has permission to view. The following roles have view permission:\n  - tenant admins\n  - members of the user's organizations\n\n\nCell2Cloud limitations: Unsupported request fields: adminOf. ","operationId":"listUsers","parameters":[{"description":"Comma-separated list of ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"ids","schema":{"example":"ent_ZJy8RTbo,ent_8GVbVkPj,ent_qREJ33rn","type":"string"}},{"description":"Name of a user. Restricts results to those with the specified name.","in":"query","name":"name","schema":{"type":"string"}},{"description":"Name substring of a user. Restricts results to those with names that include the provided substring.","in":"query","name":"nameIncludes","schema":{"type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, case insensitive.  Warning - this filter can be non-performant due to case insensitivity.\n","in":"query","name":"names.anyOf","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, case sensitive.\n","in":"query","name":"names.anyOf.caseSensitive","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those modified in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models modified within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for modified models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models modified after a certain date","value":"> 2022-03-01"}},"in":"query","name":"modifiedAt","schema":{"type":"string"}},{"description":"Comma-separated list of organization and/or team API IDs. Restricts results to users that are members of all given groups.","in":"query","name":"memberOf","schema":{"type":"string"}},{"description":"Comma-separated list of organization and/or team API IDs. Restricts results to users that are admins of all given groups.","in":"query","name":"adminOf","schema":{"type":"string"}},{"description":"Comma-separated list of handles. Restricts results to the users with the specified handles.","in":"query","name":"handles","schema":{"type":"string"}},{"description":"Comma-separated list of emails. Maximum of 100. Restricts results to the users with the specified emails.","in":"query","name":"email.anyOf","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the >, >=, <, <=, operators. Time zone defaults to UTC. Restricts results to users who have last changed their password in the specified range. e.g. > 2017-04-30. If \"null\" is provided returns users that have no password set (SAML).\n","in":"query","name":"passwordLastChangedAt","schema":{"type":"string"}},{"in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"minimum":1,"nullable":false,"type":"integer"}},{"description":"Token for pagination","in":"query","name":"nextToken","schema":{"type":"string"}},{"in":"query","name":"sort","schema":{"default":"modifiedAt:desc","description":"Sets the sort-order of the response. Valid sorts are modifiedAt (modified time, most recent first) and name (user name, alphabetical). Optionally add :asc or :desc to specify ascending or descending order.\n","enum":["createdAt","createdAt:asc","createdAt:desc","modifiedAt","modifiedAt:asc","modifiedAt:desc","name","name:asc","name:desc"],"nullable":false,"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/UsersPaginatedList"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List users","tags":["Users"],"x-cell2cloud-compatibility":{"omittedRequestFields":["adminOf"],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/users/{user_id}":{"get":{"description":"Returns a user by ID if the caller has permission to view. The following roles have view permission:\n  - tenant admins\n  - members of any of the user's organizations\n\n\nCell2Cloud limitations: Unsupported request fields: adminOf. ","operationId":"getUser","parameters":[{"description":"ID of user to get","in":"path","name":"user_id","required":true,"schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/User"}}},"description":"OK"},"404":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/NotFoundError"}}},"description":"Not Found"}},"summary":"Get a user by ID","tags":["Users"],"x-cell2cloud-compatibility":{"omittedRequestFields":["adminOf"],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/entries":{"get":{"description":"List notebook entries","operationId":"listEntries","parameters":[{"description":"Number of results to return. Defaults to 50, maximum of 100.","in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"minimum":1,"nullable":false,"type":"integer"}},{"description":"Token for pagination","in":"query","name":"nextToken","schema":{"type":"string"}},{"description":"Method by which to order search results. Valid sorts are modifiedAt (modified time, most recent first) and name (entity name, alphabetical). Optionally add :asc or :desc to specify ascending or descending order.\n","in":"query","name":"sort","schema":{"default":"modifiedAt:desc","enum":["createdAt","createdAt:asc","createdAt:desc","modifiedAt","modifiedAt:asc","modifiedAt:desc","name","name:asc","name:desc"],"nullable":false,"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those modified in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models modified within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for modified models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models modified after a certain date","value":"> 2022-03-01"}},"in":"query","name":"modifiedAt","schema":{"type":"string"}},{"description":"Name of an Entry. Restricts results to those with the specified name.","in":"query","name":"name","schema":{"type":"string"}},{"description":"ID of a project. Restricts results to those in the project.","in":"query","name":"projectId","schema":{"type":"string"}},{"description":"Archive reason. Restricts items to those with the specified archive reason. Use \"NOT_ARCHIVED\" to filter for unarchived entries. Use \"ANY_ARCHIVED\" to filter for archived entries regardless of reason. Use \"ANY_ARCHIVED_OR_NOT_ARCHIVED\" to return items for both archived and unarchived.\n","examples":{"1_not_archived":{"summary":"Only include unarchived items (default).","value":"NOT_ARCHIVED"},"2_archived_reason":{"summary":"Includes items archived for a specific reason.","value":"Retired"},"3_any_archived":{"summary":"Includes items archived for any reason.","value":"ANY_ARCHIVED"},"4_any_archived_or_not_archived":{"summary":"Includes both archived and unarchived items.","value":"ANY_ARCHIVED_OR_NOT_ARCHIVED"}},"in":"query","name":"archiveReason","schema":{"type":"string"}},{"description":"Restrict results to those with the given review status. Supported statuses: IN_PROGRESS, ACCEPTED, REJECTED, NEEDS_REVIEW, RETRACTED\n","in":"query","name":"reviewStatus","schema":{"enum":["IN_PROGRESS","ACCEPTED","REJECTED","NEEDS_REVIEW","RETRACTED"],"type":"string"}},{"description":"Comma-separated list of entry IDs. Restricts results to those mentioned within the entries in this list.\n","in":"query","name":"mentionedIn","schema":{"type":"string"}},{"description":"Comma-separated list of resource IDs. Restricts results to entries that mention the given items.\n","in":"query","name":"mentions","schema":{"type":"string"}},{"description":"Comma-separated list of ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"ids","schema":{"type":"string"}},{"description":"ID of a schema. Restricts results to those of the specified schema.\n","in":"query","name":"schemaId","schema":{"type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, case insensitive.  Warning - this filter can be non-performant due to case insensitivity.\n","in":"query","name":"names.anyOf","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma-separated list of names. Maximum of 100. Restricts results to those that match any of the specified names, case sensitive.\n","in":"query","name":"names.anyOf.caseSensitive","schema":{"example":"MyName1,MyName2","type":"string"}},{"description":"Comma-separated list of ids. Restricts results to entries that have assignees of any of the specified ids.","in":"query","name":"assignedReviewerIds.anyOf","schema":{"example":"ent_a0SApq3z,ent_SdUvia1v","type":"string"}},{"description":"Comma separated list of users IDs.","in":"query","name":"creatorIds","schema":{"example":"ent_a0SApq3z","type":"string"}},{"description":"Comma separated list of user or app IDs. Maximum of 100.","in":"query","name":"authorIds.anyOf","schema":{"example":"ent_a0SApq3z,ent_b4AApz9b","type":"string"}},{"description":"Comma-separated list of Entry Display IDs.","in":"query","name":"displayIds","schema":{"example":"VPR001,VPR002","type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).\n\n**Note:** \"entries.days.notes\" cannot be introspected with the returning parameter, and any sub fields will be ignored. E.g., \"entries.days.notes.text\" will return the same model as \"entries.days.notes\".\n","in":"query","name":"returning","schema":{"example":"entries.id, entries.name, entries.modifiedAt","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/EntriesPaginatedList"}}},"description":"Returns a list of entries. Entries are notes that users can take. They're organized by \"days\" (which are user-configurable) and modeled within each day as a list of \"notes.\" Each note has a type - the simplest is a \"text\" type, but lists, tables, and external files are also supported.\n\n*Note:* the current Entry resource has a few limitations:\n- Formatting information is not yet supported. Header formatting, bolding, and other stylistic information is not presented.\n- Data in tables is presented as text always - numeric values will need to be parsed into floats or integers, as appropriate.\n\nNote: Data in Results tables are not accessible through this API call. Results table data can be called through the Results API calls.\n"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List entries","tags":["Entries"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/entries/{entry_id}":{"get":{"description":"Get a notebook entry by ID","operationId":"getEntry","parameters":[{"description":"ID of the entry","in":"path","name":"entry_id","required":true,"schema":{"type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).\n\n**Note:** \"days.notes\" cannot be introspected with the returning parameter, and any sub fields will be ignored. E.g., \"days.notes.text\" will return the same model as \"days.notes\".\n","in":"query","name":"returning","schema":{"example":"id, name, modifiedAt","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"type":"object","properties":{"entry":{"$ref":"#/components/schemas/EntryById"}},"required":["entry"]}}},"description":"Returns a single entry. Entries are notes that users can take. They're organized by \"days\" (which are user-configurable) and modeled within each day as a list of \"notes.\" Each note has a type - the simplest is a \"text\" type, but lists, tables, and external files are also supported.\n\n*Note:* the current Entry resource has a few limitations:\n- Formatting information is not yet supported. Header formatting, bolding, and other stylistic information is not presented.\n- Data in tables is presented as text always - numeric values will need to be parsed into floats or integers, as appropriate.\n\nNote: Data in Results tables are not accessible through this API call. Results table data can be called through the Results API calls.\n"},"404":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/NotFoundError"}}},"description":"Not Found"}},"summary":"Get a notebook entry by ID","tags":["Entries"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]},"patch":{"description":"Update a notebook entry's metadata","operationId":"updateEntry","parameters":[{"description":"ID of the entry","in":"path","name":"entry_id","required":true,"schema":{"type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).\n\n**Note:** \"days.notes\" cannot be introspected with the returning parameter, and any sub fields will be ignored. E.g., \"days.notes.text\" will return the same model as \"days.notes\".\n","in":"query","name":"returning","schema":{"example":"id, name, modifiedAt","type":"string"}}],"requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/EntryUpdate"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/Entry"}}},"description":"OK"}},"summary":"Update a notebook entry's metadata","tags":["Entries"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/entry-templates":{"get":{"description":"List entry templates","operationId":"listEntryTemplates","parameters":[{"description":"Number of results to return. Defaults to 50, maximum of 100.","in":"query","name":"pageSize","schema":{"default":50,"maximum":100,"minimum":1,"nullable":false,"type":"integer"}},{"description":"Token for pagination","in":"query","name":"nextToken","schema":{"type":"string"}},{"description":"Datetime, in RFC 3339 format. Supports the > and < operators. Time zone defaults to UTC. Restricts results to those modified in the specified range. e.g. > 2017-04-30. Date ranges can be specified with the following nomenclature > YYYY-MM-DD AND <YYYY-MM-DD.\n","examples":{"and-range":{"summary":"Filter for all models modified within a certain range using the AND operator.","value":"> 2022-03-01 AND < 2022-04-01"},"full-rfc-3339-format":{"summary":"Filter for modified models using the full RFC 3339 format","value":"> 2020-12-31T21:07:14-05:00"},"greater-than-example":{"summary":"Filter for all models modified after a certain date","value":"> 2022-03-01"}},"in":"query","name":"modifiedAt","schema":{"type":"string"}},{"description":"Name of an Entry Template. Restricts results to those with the specified name.","in":"query","name":"name","schema":{"type":"string"}},{"description":"ID of a template collection. Resticts results to those in the template collection.\n","in":"query","name":"templateCollectionId","schema":{"example":"tmplcol_jC7rOniv","type":"string"}},{"description":"Comma-separated list of ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"ids","schema":{"type":"string"}},{"description":"ID of a schema. Restricts results to those of the specified schema.\n","in":"query","name":"schemaId","schema":{"type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).\n\n**Note:** \"entryTemplates.days.notes\" cannot be introspected with the returning parameter, and any sub fields will be ignored. E.g., \"entryTemplates.days.notes.text\" will return the same model as \"entryTemplates.days.notes\".\n","in":"query","name":"returning","schema":{"example":"entryTemplates.id,entryTemplates.modifiedAt","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/EntryTemplatesPaginatedList"}}},"description":"Returns a list of entry templates. Entry templates are templates that users can base new notebook entries off of.\n"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List entry templates","tags":["Entries"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/entry-templates/{entry_template_id}":{"get":{"description":"Get a notebook template entry by ID","operationId":"getEntryTemplate","parameters":[{"description":"ID of the entry template","in":"path","name":"entry_template_id","required":true,"schema":{"type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).\n\n**Note:** \"days.notes\" cannot be introspected with the returning parameter, and any sub fields will be ignored. E.g., \"days.notes.text\" will return the same model as \"days.notes\".\n","in":"query","name":"returning","schema":{"example":"id,modifiedAt","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/EntryTemplate"}}},"description":"Returns a single entry template. Entry templates are templates that users can base new notebook entries off of.\n"}},"summary":"Get a notebook template entry by ID","tags":["Entries"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/files":{"get":{"description":"List files\n\nCell2Cloud limitations: Unsupported request fields: originIds, displayIds, mentionedIn. ","operationId":"listFiles","parameters":[{"$ref":"#/components/parameters/listingPageSize"},{"$ref":"#/components/parameters/listingNextToken"},{"$ref":"#/components/parameters/listingSortNameModifiedCreated"},{"$ref":"#/components/parameters/archiveReasonFilter"},{"$ref":"#/components/parameters/createdAtFilter"},{"$ref":"#/components/parameters/creatorIdsFilter"},{"$ref":"#/components/parameters/folderIdFilter"},{"$ref":"#/components/parameters/mentionedInFilter"},{"$ref":"#/components/parameters/modifiedAtFilter"},{"$ref":"#/components/parameters/nameFilter"},{"$ref":"#/components/parameters/nameIncludesFilter"},{"$ref":"#/components/parameters/namesAnyOfCaseSensitiveFilter"},{"$ref":"#/components/parameters/namesAnyOfFilter"},{"$ref":"#/components/parameters/originFilter"},{"description":"Comma-separated list of ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"ids","schema":{"example":"file_Q6uhNZvw,file_OwmERWGE,file_nzuDFhNvz","type":"string"}},{"description":"Comma-separated list of display ids. Matches all of the provided IDs, or returns a 400 error that includes a list of which IDs are invalid.\n","in":"query","name":"displayIds","schema":{"example":"FILE1,FILE2,FILE3","type":"string"}},{"description":"Comma-separated list of fields to return. Modifies the output shape. To return all keys at a given level, enumerate them or use the wildcard, '*'. For more information, [click here](https://docs.benchling.com/docs/getting-started-1#returning-query-parameter).","in":"query","name":"returning","schema":{"example":"files.id,files.modifiedAt","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/FilesPaginatedList"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ListingError"}}},"description":"Bad Request"}},"summary":"List files","tags":["Files"],"x-cell2cloud-compatibility":{"omittedRequestFields":["originIds","displayIds","mentionedIn"],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/files/{file_id}":{"get":{"description":"Get a file. This endpoint returns an S3 URL, from which you can download the file contents.\n\nNote: URL is valid for 1 hour after being returned from this endpoint. It should not be stored\npersistently for later use.\n\n\nCell2Cloud limitations: Unsupported request fields: originIds, displayIds, mentionedIn. ","operationId":"getFile","parameters":[{"description":"The ID of the file","in":"path","name":"file_id","required":true,"schema":{"example":"file_Of5GuBSq","type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/File"}}},"description":"OK","headers":{"Content-Location":{"description":"The S3 URL from which the file contents can be downloaded","schema":{"example":"https://benchling-location.s3.amazonaws.com/deploys/location/pipeline_files/.../IC50Chart.png?...\n","type":"string"}}}},"403":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ForbiddenError"}}},"description":"Forbidden"},"404":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/NotFoundError"}}},"description":"Not Found"}},"summary":"Get a file","tags":["Files"],"x-cell2cloud-compatibility":{"omittedRequestFields":["originIds","displayIds","mentionedIn"],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/assay-results:archive":{"post":{"description":"Results that have been added to a Legacy Result or Legacy Run table in a Notebook Entry **cannot** be Archived.\n","operationId":"archiveAssayResults","requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AssayResultsArchive"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/AssayResultIdsResponse"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"Archive 1 or more results.","tags":["Assay Results"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/containers/{destination_container_id}:transfer":{"post":{"description":"Transfers a volume of an entity or container into a destination container.\nTransfering a volume is cumulative with the existing destination container's contents. To transfer an entire container's contents, the sourceContainerId should be specified. To otherwise transfer multiple entities within a container, you can make multiple calls to this endpoint, specifying a single entity with each call.\n\n\nCell2Cloud limitations: Unsupported request fields: sourceEntityId, sourceBatchId, destinationContents, destinationQuantity, destinationVolume, sampleOwnerIds, restrictedSamplePartyIds, restrictionStatus. ","operationId":"transferIntoContainer","parameters":[{"in":"path","name":"destination_container_id","required":true,"schema":{"type":"string"}}],"requestBody":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ContainerTransfer"}}}},"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/EmptyObject"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"},"403":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ForbiddenRestrictedSampleError"}}},"description":"Forbidden"}},"summary":"Transfer into container","tags":["Containers"],"x-cell2cloud-compatibility":{"omittedRequestFields":["sourceEntityId","sourceBatchId","destinationContents","destinationQuantity","destinationVolume","sampleOwnerIds","restrictedSamplePartyIds","restrictionStatus"],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/registries/{registry_id}/entity-schemas":{"get":{"deprecated":true,"description":"List entity schemas by registry. Deprecated - use Schemas endpoints instead.","operationId":"listEntitySchemasByRegistry","parameters":[{"description":"ID for the registry","in":"path","name":"registry_id","required":true,"schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DeprecatedEntitySchemasList"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List entity schemas by registry","tags":["Registry"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/registries/{registry_id}/container-schemas":{"get":{"deprecated":true,"description":"List container schemas by registry. Deprecated - use Schemas endpoints instead.","operationId":"listContainerSchemasByRegistry","parameters":[{"description":"ID for the registry","in":"path","name":"registry_id","required":true,"schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/ContainerSchemasList"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List container schemas by registry","tags":["Registry"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/registries/{registry_id}/plate-schemas":{"get":{"deprecated":true,"description":"List plate schemas by registry. Deprecated - use Schemas endpoints instead.","operationId":"listPlateSchemasByRegistry","parameters":[{"description":"ID for the registry","in":"path","name":"registry_id","required":true,"schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/PlateSchemasList"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List plate schemas by registry","tags":["Registry"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/registries/{registry_id}/box-schemas":{"get":{"deprecated":true,"description":"List box schemas by registry. Deprecated - use Schemas endpoints instead.","operationId":"listBoxSchemasByRegistry","parameters":[{"description":"ID for the registry","in":"path","name":"registry_id","required":true,"schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BoxSchemasList"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List box schemas by registry","tags":["Registry"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/registries/{registry_id}/location-schemas":{"get":{"deprecated":true,"description":"List location schemas by registry. Deprecated - use Schemas endpoints instead.","operationId":"listLocationSchemasByRegistry","parameters":[{"description":"ID for the registry","in":"path","name":"registry_id","required":true,"schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/LocationSchemasList"}}},"description":"OK"},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List location schemas by registry","tags":["Registry"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}},"/api/v2/registries/{registry_id}/dropdowns":{"get":{"deprecated":true,"description":"List dropdowns by registry","operationId":"listDropdownsByRegistry","parameters":[{"description":"ID of the registry to list the dropdowns for.","in":"path","name":"registry_id","required":true,"schema":{"type":"string"}}],"responses":{"200":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/DropdownsRegistryList"}}},"description":"OK","headers":{"x-rate-limit-limit":{"description":"The number of allowed requests in the current rate-limit period","schema":{"type":"integer"}},"x-rate-limit-remaining":{"description":"The number of calls remaining in the current rate-limit period","schema":{"type":"integer"}},"x-rate-limit-reset":{"description":"The number of seconds remaining in the current rate-limit period","schema":{"type":"integer"}}}},"400":{"content":{"application/json":{"schema":{"$ref":"#/components/schemas/BadRequestError"}}},"description":"Bad Request"}},"summary":"List dropdowns for a given registry","tags":["Registry"],"x-cell2cloud-compatibility":{"omittedRequestFields":[],"omittedResponseFields":[],"acceptance":"requires paired source and target verification"},"security":[{"ApiKeyBasic":[]},{"BearerAuth":[]}]}}},"components":{"examples":{"AIGGenerateInputTaskResponse":{"value":{"response":{"apiURL":"https://benchling.com/api/v2/automation-input-generators/aif_C3wGA9HF","assayRunId":"588aca02-1a20-4b94-a40f-b3f3a0081749","automationFileConfig":{"name":"MyInstrumentName"},"file":{"id":"c33fe52d-fe6a-4c98-adcd-211bdf6778f7","mimeType":"text/csv","name":"MyInstrumentInputFile.csv","type":"RAW_FILE","uploadStatus":"IN_PROGRESS"},"id":"aif_C3wGA9HF","status":"SUCCEEDED"},"status":"SUCCEEDED"}},"AOPProcessOutputTaskResponse":{"value":{"response":{"apiURL":"https://benchling.com/api/v2/automation-output-processors/aop_C3wGA9HF","archiveRecord":{"reason":"Made in 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